Commit Graph

9433 Commits (c30b6f20a62b902974de6546931a7e89da745da7)

Author SHA1 Message Date
Marco Ratto c30b6f20a6 Added routines that factor out posterior samplers into the iteration routine posterior_sampler_iteration.m.
It generalizes the random_walk_metropolis_hastings.m structure but adds two new items:
- check_posterior_sampler_options.m which is a wrapper for method specific options (stored in options_.posterior_options)
- posterior_sampler_iteration.m which is a wrapper of the individual iteration of any posterior sampler.

It already embeds, with parallelization implementation:
- random_walk metropolis hastings
- independent metropolis hastings
- slice sampler

It also contains a quick fix for TARB, although the latter should be embedded in posterior_sampler_iteration.m as well.

Any new posterior sampler can be simply added to posterior_sampler_iteration.m, with  wrapper to specific iterations in check_posterior_sampler_options.m
2016-05-19 14:34:09 +02:00
Marco Ratto b1b901fc61 Added SLICE sampler core routines 2016-05-19 14:34:09 +02:00
Marco Ratto 951dfe8ff4 When mh_posterior_mode_estimation, trap cases where the prior mode is at the boundary. 2016-05-19 14:34:09 +02:00
Marco Ratto a3ab6de6c8 Added function to compute of inefficiency factors, used in McMCDiagnostics.m
Requires missing autocorr (available in some MATLAB toolboxes).
Requires factor out CutSample in dynare_estimation_1.m
2016-05-19 14:34:09 +02:00
Houtan Bastani 4ea52066b9 preprocessor: simplify a5590f7917 2016-05-19 12:10:19 +02:00
Houtan Bastani a5590f7917 preprocessor: fix bug in debian compilation 2016-05-19 12:06:53 +02:00
Houtan Bastani 58eb60c95d fix copyright dates, headers 2016-05-18 15:06:49 +02:00
Houtan Bastani 6a0de7a724 Merge pull request #1189 from rattoma/gsa
gsa and identification fixes
2016-05-18 15:01:19 +02:00
Houtan Bastani 6b7a77d5a9 preprocessor: replace no_2nd_order_params_derivs with params_deriv_order. #1187 2016-05-18 12:26:19 +02:00
Houtan Bastani 253e6c8dfb Revert "Revert "preprocessor: add option no_2nd_order_params_derivs. #1187""
This reverts commit c496d6f5ca.
2016-05-18 10:34:45 +02:00
Houtan Bastani 42895ce32c Revert "preprocessor: add params_derivs_order to identification and sensitivity. #1187"
This reverts commit 6192a6a776.
2016-05-18 10:33:45 +02:00
Stéphane Adjemian 706351f1a0 Merge pull request #1190 from JohannesPfeifer/dsgevar
Filter out error code 6 in dsge_var_likelihood.m
2016-05-17 22:36:46 +02:00
Johannes Pfeifer c05c66cbaa Filter out error code 6 in dsge_var_likelihood.m
Crashes otherwise
2016-05-17 20:56:25 +02:00
Houtan Bastani 6192a6a776 preprocessor: add params_derivs_order to identification and sensitivity. #1187 2016-05-17 17:18:16 +02:00
Houtan Bastani 4b71593b3c preprocessor: fix typo 2016-05-17 15:42:23 +02:00
Houtan Bastani c496d6f5ca Revert "preprocessor: add option no_2nd_order_params_derivs. #1187"
This reverts commit 024586fbb1.
2016-05-17 15:37:46 +02:00
Houtan Bastani 308828aa95 Revert "preprocessor: params_derivs_file: by default, compute second order derivs wrt params; simplify code; #1187"
This reverts commit 1442f83037.
2016-05-17 15:37:29 +02:00
Houtan Bastani 626f8af374 preprocessor: add analytic_derivation_mode option to identification and sensitivity. #1187 2016-05-17 15:32:51 +02:00
Houtan Bastani 7c00ae723e preprocessor: add analytic_derivation option to identification and sensitivity. #1187 2016-05-17 12:43:05 +02:00
Marco Ratto 42170c6c13 Fixes around models with unit roots. 2016-05-17 11:47:07 +02:00
Marco Ratto c9bc685049 Fix determination of full rank subspace of simulated moment uncertainty 2016-05-17 09:38:06 +02:00
Marco Ratto f0b346b397 added waitbar, to monitor computations [especially useful for large models] 2016-05-17 08:41:55 +02:00
Marco Ratto 7c8878c071 Allow neighborhood_width sampling in Morris + bug fix. 2016-05-17 08:41:16 +02:00
Marco Ratto 28aeb9f308 bug fix 2016-05-17 08:40:32 +02:00
Houtan Bastani 85e3ddd2d4 build system: modify package creation for OS X. Min requirements OS X 10.8+ and 64-bit Matlab 2016-05-13 15:52:49 +02:00
Houtan Bastani 5723e7ea58 build system: remove support for 32-bit Matlab on OS X 2016-05-13 10:53:55 +02:00
Houtan Bastani 1442f83037 preprocessor: params_derivs_file: by default, compute second order derivs wrt params; simplify code; #1187 2016-05-13 10:48:49 +02:00
Houtan Bastani 024586fbb1 preprocessor: add option no_2nd_order_params_derivs. #1187 2016-05-12 14:40:28 +02:00
Houtan Bastani 9d26ab46e9 preprocessor: only compute first order derivatives w.r.t. parameters with identification. closes #1187 2016-05-12 12:02:34 +02:00
Houtan Bastani 89667ea8da remove unused file. closes #1172 2016-05-11 15:12:27 +02:00
Houtan Bastani a4b6dfa3f3 preprocessor: interface for osr_params_bounds. #948 2016-05-10 18:01:00 +02:00
Michel Juillard 31f8d61586 make estimation honor steady state nocheck option 2016-05-10 15:54:11 +02:00
Houtan Bastani e1bdd830af testsuite: fix race condition in accessing .mat file 2016-05-10 11:34:17 +02:00
Houtan Bastani d5dff28704 preprocessor: fix bug introduced in c9ca46f228. Further simplify ParsingDriver::declare_nonstationary_var(). Closes #1184 2016-05-09 16:10:04 +02:00
Houtan Bastani ccb197e74f fix copyright dates 2016-05-09 12:42:58 +02:00
Michel Juillard 5e5157e375 loglinear: bug correction 2016-05-06 10:12:12 +02:00
Michel Juillard 67ea280773 adding missing semi-colon 2016-05-06 10:11:53 +02:00
Michel Juillard d9e73b5477 fixing test case for loglinear models 2016-05-06 09:07:43 +02:00
Michel Juillard ef232ac436 fixed log_variable function 2016-05-05 20:53:22 +02:00
Michel Juillard 034bd0367b test cases for loglinear with lead/lagged exogenous variables 2016-05-05 20:41:02 +02:00
Michel Juillard 3c7c2f46a4 more fixes for loglinear with lead/lagged exogenous variables 2016-05-05 20:41:02 +02:00
Michel Juillard 7e13fe5ef7 fix loglinear option with leaded or lagged exogenous variables 2016-05-05 20:41:02 +02:00
Stéphane Adjemian e07d97a16e Merge pull request #1186 from rattoma/gsa
gsa and identification fixes
2016-05-05 19:19:10 +02:00
Marco Ratto 1b769d1d5f 1) fixed bug with initialization of infox
2) distinguish between no solution (iwrong index) and violation of prior restrictions (inorestriction)
3) smirnov tests for indeterminacy and explosive roots should be done EXCLUDING no solution cases
2016-05-05 16:53:18 +02:00
Marco Ratto 8e1d225832 Allow to perform neighborhood_width sampling around calibrated values; 2016-05-05 16:18:17 +02:00
Marco Ratto 0e402fa7e9 Filter out cases where too few samples are available for ANOVA estimation 2016-05-05 16:11:53 +02:00
Marco Ratto 8b54354a27 Make identification compliant with calibration parameter set [bug fix] 2016-05-05 16:08:14 +02:00
Houtan Bastani bebcfffe04 fix license, file copyright errors 2016-05-04 16:30:16 +02:00
Houtan Bastani 25121bca4f fix copyright dates 2016-05-04 16:05:31 +02:00
Johannes Pfeifer b364dd1d4c Account for Matlab 2016a in installer and mex-folder
Note that 32bit is not supported anymore

(cherry picked from commit e37b32b01534ffe9a5a5ec3f00f745720b75a83f)
2016-05-04 11:12:35 +02:00