Commit Graph

152 Commits (0cdfe4d6c7d773059e6346bc75f80c5ae179267d)

Author SHA1 Message Date
Sébastien Villemot e123670675 Fix bug introduced in 952139b
The 'hh' variable is now always defined, so we now test if it is empty.
2013-09-13 18:23:24 +02:00
Stéphane Adjemian (Charybdis) 952139bbc9 Changes related to the treatment of the (optionally) provided mode file.
(1) Added more checks on the content of the provided mode file compared the the list of declared parameters (the condition on the number of parameters is not strong enough).

(2) Added a mechanism to adapt the content of the mode file if possible. For instance, if the estimated parameters are a subset of the parameters in the mode file, we only need to discard some of the parameters in the mode file.

(3) Added output argument in dynare_estimation_init, which returns the hessian matrix (hh) with the estimated mode.
2013-09-10 22:25:16 +02:00
Stéphane Adjemian (Charybdis) afed204526 Cosmetic. Renamed hh (figure handle not to be confused hessian matrix) as fh. 2013-09-10 22:25:16 +02:00
Johannes Pfeifer c2e6feeb75 Deletion of unused definition of H_is_diagonal
Cosmetic fix
2013-09-04 11:11:29 +02:00
Johannes Pfeifer e1a0fd0524 Bugfix for conditional variance decomposition
sigma_e_is_diagonal was erroneously set to 0 if the covariance matrix was diagonal, but contained a 0 on the main diagonal.
2013-09-04 11:11:14 +02:00
Johannes Pfeifer 01c3724371 Deal with pathological case where nobs=1
In this case the plots crash due to an invalid xlim. Also adds markers if only one point is plotted
2013-08-15 16:35:01 +02:00
Sébastien Villemot b4f8532bea Merge pull request #441 from JohannesPfeifer/mode_check
Bugfix for mode_check and display of parameters out of bounds
2013-08-12 03:31:50 -07:00
Stéphane Adjemian (Charybdis) 184c403375 Replaced disp(' ') by skipline(). 2013-07-10 16:16:32 +02:00
Stéphane Adjemian (Charybdis) 964b7580d8 Cosmetic change. 2013-07-10 16:15:28 +02:00
Stéphane Adjemian (Charybdis) dfc51d097a Cosmetic change. Replaced warning(...) by disp(...). 2013-07-10 16:09:31 +02:00
Stéphane Adjemian (Charybdis) 2fae989131 Rewrote the portion of code requesting a user input when non linear filters are used with a gradient based optimization routine.
Closes issues #442 and #443.
2013-07-10 16:03:49 +02:00
Johannes Pfeifer aeda8d17ff Add warning if gradient-based optimizer is used with particle-filtering and offer user choice to change mode-finder 2013-07-10 12:08:59 +02:00
Johannes Pfeifer 41f6c2ff66 Display source of non-positive definite Hessian if parameters at prior bound 2013-07-06 00:26:23 +02:00
Johannes Pfeifer d9579418fd Bugfix for correct display of names of parameters outside of bounds 2013-07-06 00:20:07 +02:00
Stéphane Adjemian (Charybdis) 08feada8b0 Fixed bug. 2013-06-24 10:24:55 +02:00
Stéphane Adjemian (Charybdis) 340bcc2739 Added an option for setting the number of points where the posterior kernel is evaluated when using mode_check. Reorganized the options_ global structure wrt mode_check. 2013-06-20 17:19:44 +02:00
Frédéric Karamé 1bbfd90498 Added online auxiliary filter as options_.mode_compute=10. 2013-06-18 16:18:55 +02:00
Stéphane Adjemian (Charybdis) c08c34223d Fixed typo and bug in MCMC diagnostics. 2013-06-13 17:14:04 +02:00
Johannes Pfeifer e8ed4c1f67 Bunch of cosmetic changes 2013-06-13 14:24:17 +02:00
Stéphane Adjemian fc83427185 Merge pull request #393 from JohannesPfeifer/display_tables
Add function for displaying estimation results
2013-05-14 03:18:19 -07:00
Johannes Pfeifer d9fb19e479 Make error message if mode violated prior more explicit 2013-05-12 13:27:55 +02:00
Johannes Pfeifer 7aea75f348 Add function for displaying estimation results
The commit moves the creation of results tables, both the ones displayed
and printed to LaTeX, from dynare_estimation_1.m to a separate function.
This factorization later allows to use this function to display results
from other estimation routines. At the same time, it removes the display
of t-statistics for posterior estimates ( #339 )
2013-05-10 18:58:08 +02:00
Johannes Pfeifer 58b6c3122f Cosmetic Changes to Graphs 2013-04-26 19:57:36 +02:00
Johannes Pfeifer 7518072e77 Fix several bugs related to estimated measurement errors
1. The first call to set_prior overwrote the first column of
estim_params_.var_endo storing the position of the variable with
measurement error in M_.endo_names with the position in
options_.var_obs. All subsequent calls to set_prior then lead to
crashes.
2. At the same time, for correlations of ME, the first column of
estim_params_.corrn still stored the position of the variable with
measurement error in M_.endo_names. But subsequent calls to it were done
as if it stored the position in options_.var_obs

I introduced two new variables in estim_params_ storing the respective
positions in var_obs so as to not necessitate changes in the
preprocessors.

3. For cases of calibrated measurement error correlations, the
covariance matrix was not updated.

4. Fixing a lot of smaller bugs related to measurement errors, including
some copy and paste errors
-
2013-03-21 20:51:12 +01:00
Johannes Pfeifer 6390830b4d Store MCMC information recorded in record in oo_
Closes issue #315 (https://github.com/DynareTeam/dynare/issues/315)
2013-03-17 22:49:28 +01:00
Sébastien Villemot 5c8efaae6c More explicit error message when posterior mode file is outdated 2013-03-08 14:31:15 +01:00
Sébastien Villemot 5c88338965 Fix mode_compute=3 under Octave 2013-01-07 15:40:48 +01:00
Sébastien Villemot 8c7e3d46ed Document when mode_compute={1,3,7} are available, and error with an informative message if not 2013-01-07 15:40:45 +01:00
Sébastien Villemot c06bd0ae75 Support nograph option for posterior distribution plots 2012-11-29 14:52:33 +01:00
Michel Juillard c722f53955 fixed bug with options mode_compute=0,mode_file=....
added tests for mode_compute=4 and mode_compute=6. They increase computing time of the
test suite by about 30 minutes.
2012-10-06 16:51:42 +02:00
Stéphane Adjemian (Charybdis) e81f9d48ac Improved display of mode_compute=6 optimization algorithm. Fixed bugs. Changed the options. 2012-09-29 00:08:05 +02:00
Stéphane Adjemian (Charybdis) 3744061112 Save the names of the estimated parameters in <MODEL_NAME>_mode.mat when mode_compute is equal to six (stochastic optimization). 2012-09-29 00:08:05 +02:00
Marco Ratto e519b04713 bug fix: when nograph=1, SmoothedShocks were not saved. 2012-08-27 17:45:47 +02:00
Marco Ratto 40e1e60fd1 1) changed options of optimizer n. 1 with analytic derivs;
2) force no analytic derivative with mode_check;
2012-07-05 10:22:36 +02:00
Stéphane Adjemian (Charybdis) b907e82e7b Removed NaNs in M_.Correlation_matrix if they are the consequence of variances (of structural innovations) calibrated to zero. 2012-06-14 15:32:14 +02:00
Marco Ratto 2fecf9946b 1) Extended optimizer = 5 for analytic derivatives;
2) Start adapting identification routines to allow computation of analytic asymptotic Hessian with KF routines
2012-06-08 14:23:18 +02:00
Stéphane Adjemian (Charybdis) 0da05ae29d Removed globals from set_all_parameters routine. 2012-06-07 15:13:39 +02:00
Stéphane Adjemian (Charybdis) e12748329b Fixed bug reported by Johannes (http://www.dynare.org/pipermail/dev/2012-May/002015.html), see also trac#257. 2012-06-06 18:25:08 +02:00
Stéphane Adjemian (Charybdis) fac9528014 Do not compute smoothed variables or forecasts if the model is
estimated with a  particle filter (the non linear  smoother is not yet
implemented).
2012-06-06 18:25:08 +02:00
Stéphane Adjemian (Charybdis) ef1146f5a3 Fixed bug trac#202. Define the sigma_e_is_diagonal flag when no shocks block is declared in the mod file. 2012-06-06 18:25:08 +02:00
Sébastien Villemot 9bea42f411 order=2 in estimation command now triggers particle filter 2012-06-06 17:08:53 +02:00
Marco Ratto 4480f5b494 Fixes around latex output: use of longtable for parameter estimates and various fixes for posterior analysis, also for parallel execution. 2012-05-30 11:22:59 +02:00
Johannes Pfeifer c0ffcf7fd8 Fix problem with smoother where original data series was not plotted 2012-05-11 19:58:16 +02:00
Marco Ratto da9ec0f187 Estimation with analytic scores and hessian;
This includes re-setting the list of output arguments in objective functions
Added test function
2012-04-29 21:18:33 +02:00
Michel Juillard e692185c6b storing oo_.prior.mean oo_.prior.variance
oo_.posterior.optimization.mode oo_.posterior.optimization.variance
oo_.posterior.metropolis.mean oo_.posterior.metropolis.variance as
aggregate arrays in addition to previous storage variable by variable
2012-04-21 21:28:03 +02:00
Michel Juillard 973302e42e fixing bugs in smoother 2012-04-18 21:15:18 +02:00
Stéphane Adjemian (Charybdis) 9cc4661942 Fixed bug in initial_estimation_checks + Cosmetic changes. 2012-03-30 11:12:59 +02:00
Michel Juillard 5d4d318bc7 fixing bug in estimation by maximum likelihood 2012-03-15 15:33:02 +01:00
Stéphane Adjemian (Charybdis) c5fa0b82a9 Merge remote-tracking branch 'marco/master' 2012-03-14 12:49:56 +01:00
Stéphane Adjemian (Charybdis) cf9e8a6714 Bug fix. When the estimation command is used, do not issue an error message if options_.order>1. In this
case reset the options_.order equal to one (except if options_.particle.status==1).
2012-03-05 14:56:02 +01:00