fixed bug with options mode_compute=0,mode_file=....
added tests for mode_compute=4 and mode_compute=6. They increase computing time of the test suite by about 30 minutes.time-shift
parent
e75b18f93b
commit
c722f53955
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@ -106,6 +106,20 @@ if ~isempty(options_.mode_file) && ~options_.mh_posterior_mode_estimation
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load(options_.mode_file);
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end
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%% load optimal_mh_scale parameter if previous run was with
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%% mode_compute=6
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mh_scale_fname = [M_.fname '_optimal_mh_scale_parameter.mat'];
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if exist(mh_scale_fname)
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if options_.mode_compute == 0
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tmp = load(mh_scale_fname,'Scale');
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bayestopt_.mh_jscale = tmp.Scale;
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clear tmp;
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else
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% remove the file if mode_compute ~= 0
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delete('mh_scale_fname')
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end
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end
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if ~isempty(estim_params_)
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set_parameters(xparam1);
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end
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@ -170,11 +184,6 @@ if isequal(options_.mode_compute,0) && isempty(options_.mode_file) && options_.m
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return
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end
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if isequal(options_.mode_compute,6)
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% Erase previously computed optimal mh scale parameter.
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delete([M_.fname '_optimal_mh_scale_parameter.mat'])
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end
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%% Estimation of the posterior mode or likelihood mode
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if ~isequal(options_.mode_compute,0) && ~options_.mh_posterior_mode_estimation
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@ -112,23 +112,12 @@ if strcmpi(ProposalFun,'rand_multivariate_normal')
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elseif strcmpi(ProposalFun,'rand_multivariate_student')
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n = options_.student_degrees_of_freedom;
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end
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% load([MhDirectoryName '/' ModelName '_mh_history.mat'],'record');
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%%%%
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%%%% NOW i run the (nblck-fblck+1) metropolis-hastings chains
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%%%%
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if any(isnan(bayestopt_.jscale)) || (options_.mode_compute==0 && ~isempty(options_.mode_file))
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if exist([ModelName '_optimal_mh_scale_parameter.mat'])% This file is created by mode_compute=6.
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load([ModelName '_optimal_mh_scale_parameter'])
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proposal_covariance_Cholesky_decomposition = d*Scale;
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else
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error('mh:: Something is wrong. I can''t figure out the value of the scale parameter.')
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end
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else
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proposal_covariance_Cholesky_decomposition = d*diag(bayestopt_.jscale);
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end
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proposal_covariance_Cholesky_decomposition = d*diag(bayestopt_.jscale);
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jloop=0;
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@ -141,8 +141,11 @@ MODFILES = \
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deterministic_simulations/rbc_det4.mod \
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deterministic_simulations/rbc_det5.mod \
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fs2000/fs2000_sd.mod \
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walsh.mod
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walsh.mod \
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estimation/fs2000_mc4.mod \
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estimation/fs2000_mc4_mf.mod \
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estimation/fs2000_mc6.mod \
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estimation/fs2000_mc6_mf.mod
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EXTRA_DIST = \
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$(MODFILES) \
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homotopy/common.mod \
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@ -193,6 +196,7 @@ EXTRA_DIST = \
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kalman_filter_smoother/fsdat_simul.m \
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kalman_filter_smoother/fs2000a_steadystate.m \
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identification/kim/kim2_steadystate.m \
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estimation/fsdat_simul.m \
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ep/mean_preserving_spread.m
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TARGETS =
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@ -0,0 +1,75 @@
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// See fs2000.mod in the examples/ directory for details on the model
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var m P c e W R k d n l gy_obs gp_obs y dA;
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varexo e_a e_m;
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parameters alp bet gam mst rho psi del;
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alp = 0.33;
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bet = 0.99;
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gam = 0.003;
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mst = 1.011;
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rho = 0.7;
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psi = 0.787;
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del = 0.02;
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model;
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dA = exp(gam+e_a);
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log(m) = (1-rho)*log(mst) + rho*log(m(-1))+e_m;
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-P/(c(+1)*P(+1)*m)+bet*P(+1)*(alp*exp(-alp*(gam+log(e(+1))))*k^(alp-1)*n(+1)^(1-alp)+(1-del)*exp(-(gam+log(e(+1)))))/(c(+2)*P(+2)*m(+1))=0;
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W = l/n;
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-(psi/(1-psi))*(c*P/(1-n))+l/n = 0;
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R = P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(-alp)/W;
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1/(c*P)-bet*P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)/(m*l*c(+1)*P(+1)) = 0;
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c+k = exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)+(1-del)*exp(-(gam+e_a))*k(-1);
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P*c = m;
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m-1+d = l;
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e = exp(e_a);
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y = k(-1)^alp*n^(1-alp)*exp(-alp*(gam+e_a));
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gy_obs = dA*y/y(-1);
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gp_obs = (P/P(-1))*m(-1)/dA;
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end;
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initval;
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k = 6;
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m = mst;
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P = 2.25;
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c = 0.45;
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e = 1;
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W = 4;
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R = 1.02;
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d = 0.85;
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n = 0.19;
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l = 0.86;
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y = 0.6;
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gy_obs = exp(gam);
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gp_obs = exp(-gam);
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dA = exp(gam);
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end;
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shocks;
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var e_a; stderr 0.014;
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var e_m; stderr 0.005;
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end;
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steady;
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check;
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estimated_params;
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alp, beta_pdf, 0.356, 0.02;
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bet, beta_pdf, 0.993, 0.002;
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gam, normal_pdf, 0.0085, 0.003;
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mst, normal_pdf, 1.0002, 0.007;
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rho, beta_pdf, 0.129, 0.223;
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psi, beta_pdf, 0.65, 0.05;
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del, beta_pdf, 0.01, 0.005;
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stderr e_a, inv_gamma_pdf, 0.035449, inf;
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stderr e_m, inv_gamma_pdf, 0.008862, inf;
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end;
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varobs gp_obs gy_obs;
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options_.solve_tolf = 1e-12;
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estimation(order=1,datafile=fsdat_simul,nobs=192,loglinear,mh_replic=2000,mh_nblocks=2,mh_jscale=0.8);
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@ -0,0 +1,73 @@
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// test mode_compute default (=4)
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// See fs2000.mod in the examples/ directory for details on the model
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var m P c e W R k d n l gy_obs gp_obs y dA;
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varexo e_a e_m;
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parameters alp bet gam mst rho psi del;
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alp = 0.33;
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bet = 0.99;
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gam = 0.003;
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mst = 1.011;
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rho = 0.7;
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psi = 0.787;
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del = 0.02;
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model;
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dA = exp(gam+e_a);
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log(m) = (1-rho)*log(mst) + rho*log(m(-1))+e_m;
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-P/(c(+1)*P(+1)*m)+bet*P(+1)*(alp*exp(-alp*(gam+log(e(+1))))*k^(alp-1)*n(+1)^(1-alp)+(1-del)*exp(-(gam+log(e(+1)))))/(c(+2)*P(+2)*m(+1))=0;
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W = l/n;
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-(psi/(1-psi))*(c*P/(1-n))+l/n = 0;
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R = P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(-alp)/W;
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1/(c*P)-bet*P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)/(m*l*c(+1)*P(+1)) = 0;
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c+k = exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)+(1-del)*exp(-(gam+e_a))*k(-1);
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P*c = m;
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m-1+d = l;
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e = exp(e_a);
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y = k(-1)^alp*n^(1-alp)*exp(-alp*(gam+e_a));
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gy_obs = dA*y/y(-1);
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gp_obs = (P/P(-1))*m(-1)/dA;
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end;
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steady_state_model;
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dA = exp(gam);
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gst = 1/dA;
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m = mst;
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khst = ( (1-gst*bet*(1-del)) / (alp*gst^alp*bet) )^(1/(alp-1));
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xist = ( ((khst*gst)^alp - (1-gst*(1-del))*khst)/mst )^(-1);
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nust = psi*mst^2/( (1-alp)*(1-psi)*bet*gst^alp*khst^alp );
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n = xist/(nust+xist);
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P = xist + nust;
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k = khst*n;
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l = psi*mst*n/( (1-psi)*(1-n) );
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c = mst/P;
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d = l - mst + 1;
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y = k^alp*n^(1-alp)*gst^alp;
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R = mst/bet;
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W = l/n;
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e = 1;
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gp_obs = m/dA;
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gy_obs = dA;
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end;
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estimated_params;
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alp, beta_pdf, 0.356, 0.02;
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bet, beta_pdf, 0.993, 0.002;
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gam, normal_pdf, 0.0085, 0.003;
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mst, normal_pdf, 1.0002, 0.007;
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rho, beta_pdf, 0.129, 0.223;
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psi, beta_pdf, 0.65, 0.05;
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del, beta_pdf, 0.01, 0.005;
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stderr e_a, inv_gamma_pdf, 0.035449, inf;
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stderr e_m, inv_gamma_pdf, 0.008862, inf;
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end;
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varobs gp_obs gy_obs;
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estimation(order=1,datafile=fsdat_simul,nobs=192,loglinear,mh_replic=0);
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@ -0,0 +1,66 @@
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// test mode_compute=0 with mode_file computed with default (mode_compute=4)
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// See fs2000.mod in the examples/ directory for details on the model
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var m P c e W R k d n l gy_obs gp_obs y dA;
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varexo e_a e_m;
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parameters alp bet gam mst rho psi del;
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model;
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dA = exp(gam+e_a);
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log(m) = (1-rho)*log(mst) + rho*log(m(-1))+e_m;
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-P/(c(+1)*P(+1)*m)+bet*P(+1)*(alp*exp(-alp*(gam+log(e(+1))))*k^(alp-1)*n(+1)^(1-alp)+(1-del)*exp(-(gam+log(e(+1)))))/(c(+2)*P(+2)*m(+1))=0;
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W = l/n;
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-(psi/(1-psi))*(c*P/(1-n))+l/n = 0;
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R = P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(-alp)/W;
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1/(c*P)-bet*P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)/(m*l*c(+1)*P(+1)) = 0;
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c+k = exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)+(1-del)*exp(-(gam+e_a))*k(-1);
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P*c = m;
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m-1+d = l;
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e = exp(e_a);
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y = k(-1)^alp*n^(1-alp)*exp(-alp*(gam+e_a));
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gy_obs = dA*y/y(-1);
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gp_obs = (P/P(-1))*m(-1)/dA;
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end;
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steady_state_model;
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dA = exp(gam);
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gst = 1/dA;
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m = mst;
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khst = ( (1-gst*bet*(1-del)) / (alp*gst^alp*bet) )^(1/(alp-1));
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xist = ( ((khst*gst)^alp - (1-gst*(1-del))*khst)/mst )^(-1);
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nust = psi*mst^2/( (1-alp)*(1-psi)*bet*gst^alp*khst^alp );
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n = xist/(nust+xist);
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P = xist + nust;
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k = khst*n;
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l = psi*mst*n/( (1-psi)*(1-n) );
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c = mst/P;
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d = l - mst + 1;
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y = k^alp*n^(1-alp)*gst^alp;
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R = mst/bet;
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W = l/n;
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e = 1;
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gp_obs = m/dA;
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gy_obs = dA;
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end;
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estimated_params;
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alp, beta_pdf, 0.356, 0.02;
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bet, beta_pdf, 0.993, 0.002;
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gam, normal_pdf, 0.0085, 0.003;
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mst, normal_pdf, 1.0002, 0.007;
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rho, beta_pdf, 0.129, 0.223;
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psi, beta_pdf, 0.65, 0.05;
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del, beta_pdf, 0.01, 0.005;
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stderr e_a, inv_gamma_pdf, 0.035449, inf;
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stderr e_m, inv_gamma_pdf, 0.008862, inf;
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end;
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varobs gp_obs gy_obs;
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estimation(order=1,datafile=fsdat_simul,nobs=192,loglinear,mode_compute=0,mode_file=fs2000_mc4_mode,mh_replic=2000,mh_jscale=0.8);
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@ -0,0 +1,73 @@
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// test mode_compute=6
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// See fs2000.mod in the examples/ directory for details on the model
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var m P c e W R k d n l gy_obs gp_obs y dA;
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varexo e_a e_m;
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parameters alp bet gam mst rho psi del;
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alp = 0.33;
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bet = 0.99;
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gam = 0.003;
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mst = 1.011;
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rho = 0.7;
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psi = 0.787;
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del = 0.02;
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model;
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dA = exp(gam+e_a);
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log(m) = (1-rho)*log(mst) + rho*log(m(-1))+e_m;
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-P/(c(+1)*P(+1)*m)+bet*P(+1)*(alp*exp(-alp*(gam+log(e(+1))))*k^(alp-1)*n(+1)^(1-alp)+(1-del)*exp(-(gam+log(e(+1)))))/(c(+2)*P(+2)*m(+1))=0;
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W = l/n;
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-(psi/(1-psi))*(c*P/(1-n))+l/n = 0;
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R = P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(-alp)/W;
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1/(c*P)-bet*P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)/(m*l*c(+1)*P(+1)) = 0;
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c+k = exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)+(1-del)*exp(-(gam+e_a))*k(-1);
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P*c = m;
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m-1+d = l;
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e = exp(e_a);
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y = k(-1)^alp*n^(1-alp)*exp(-alp*(gam+e_a));
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gy_obs = dA*y/y(-1);
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gp_obs = (P/P(-1))*m(-1)/dA;
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end;
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steady_state_model;
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dA = exp(gam);
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gst = 1/dA;
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m = mst;
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khst = ( (1-gst*bet*(1-del)) / (alp*gst^alp*bet) )^(1/(alp-1));
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xist = ( ((khst*gst)^alp - (1-gst*(1-del))*khst)/mst )^(-1);
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nust = psi*mst^2/( (1-alp)*(1-psi)*bet*gst^alp*khst^alp );
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n = xist/(nust+xist);
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P = xist + nust;
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k = khst*n;
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l = psi*mst*n/( (1-psi)*(1-n) );
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c = mst/P;
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d = l - mst + 1;
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y = k^alp*n^(1-alp)*gst^alp;
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R = mst/bet;
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W = l/n;
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e = 1;
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gp_obs = m/dA;
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gy_obs = dA;
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end;
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estimated_params;
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alp, beta_pdf, 0.356, 0.02;
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bet, beta_pdf, 0.993, 0.002;
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gam, normal_pdf, 0.0085, 0.003;
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mst, normal_pdf, 1.0002, 0.007;
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rho, beta_pdf, 0.129, 0.223;
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psi, beta_pdf, 0.65, 0.05;
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del, beta_pdf, 0.01, 0.005;
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stderr e_a, inv_gamma_pdf, 0.035449, inf;
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stderr e_m, inv_gamma_pdf, 0.008862, inf;
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end;
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varobs gp_obs gy_obs;
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estimation(order=1,datafile=fsdat_simul,nobs=192,loglinear,mh_replic=0,mode_compute=6);
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@ -0,0 +1,66 @@
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// test mode_compute=0 with mode_file computed with mode_compute=6
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// See fs2000.mod in the examples/ directory for details on the model
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var m P c e W R k d n l gy_obs gp_obs y dA;
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varexo e_a e_m;
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parameters alp bet gam mst rho psi del;
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model;
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dA = exp(gam+e_a);
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log(m) = (1-rho)*log(mst) + rho*log(m(-1))+e_m;
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-P/(c(+1)*P(+1)*m)+bet*P(+1)*(alp*exp(-alp*(gam+log(e(+1))))*k^(alp-1)*n(+1)^(1-alp)+(1-del)*exp(-(gam+log(e(+1)))))/(c(+2)*P(+2)*m(+1))=0;
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W = l/n;
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-(psi/(1-psi))*(c*P/(1-n))+l/n = 0;
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R = P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(-alp)/W;
|
||||
1/(c*P)-bet*P*(1-alp)*exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)/(m*l*c(+1)*P(+1)) = 0;
|
||||
c+k = exp(-alp*(gam+e_a))*k(-1)^alp*n^(1-alp)+(1-del)*exp(-(gam+e_a))*k(-1);
|
||||
P*c = m;
|
||||
m-1+d = l;
|
||||
e = exp(e_a);
|
||||
y = k(-1)^alp*n^(1-alp)*exp(-alp*(gam+e_a));
|
||||
gy_obs = dA*y/y(-1);
|
||||
gp_obs = (P/P(-1))*m(-1)/dA;
|
||||
end;
|
||||
|
||||
steady_state_model;
|
||||
dA = exp(gam);
|
||||
gst = 1/dA;
|
||||
m = mst;
|
||||
|
||||
khst = ( (1-gst*bet*(1-del)) / (alp*gst^alp*bet) )^(1/(alp-1));
|
||||
xist = ( ((khst*gst)^alp - (1-gst*(1-del))*khst)/mst )^(-1);
|
||||
nust = psi*mst^2/( (1-alp)*(1-psi)*bet*gst^alp*khst^alp );
|
||||
n = xist/(nust+xist);
|
||||
P = xist + nust;
|
||||
k = khst*n;
|
||||
|
||||
l = psi*mst*n/( (1-psi)*(1-n) );
|
||||
c = mst/P;
|
||||
d = l - mst + 1;
|
||||
y = k^alp*n^(1-alp)*gst^alp;
|
||||
R = mst/bet;
|
||||
|
||||
W = l/n;
|
||||
e = 1;
|
||||
|
||||
gp_obs = m/dA;
|
||||
gy_obs = dA;
|
||||
end;
|
||||
|
||||
estimated_params;
|
||||
alp, beta_pdf, 0.356, 0.02;
|
||||
bet, beta_pdf, 0.993, 0.002;
|
||||
gam, normal_pdf, 0.0085, 0.003;
|
||||
mst, normal_pdf, 1.0002, 0.007;
|
||||
rho, beta_pdf, 0.129, 0.223;
|
||||
psi, beta_pdf, 0.65, 0.05;
|
||||
del, beta_pdf, 0.01, 0.005;
|
||||
stderr e_a, inv_gamma_pdf, 0.035449, inf;
|
||||
stderr e_m, inv_gamma_pdf, 0.008862, inf;
|
||||
end;
|
||||
|
||||
varobs gp_obs gy_obs;
|
||||
|
||||
estimation(order=1,datafile=fsdat_simul,nobs=192,loglinear,mode_compute=0,mode_file=fs2000_mc6_mode,mh_replic=2000,mh_jscale=0.8);
|
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Reference in New Issue