Commit Graph

5637 Commits (ab8aa917e325a927535fdfafee73d2f20249e822)

Author SHA1 Message Date
Marco Ratto 0c01565298 Allow sampler specific options via optim;
bug fixes on options logic
2016-05-19 14:34:09 +02:00
Marco Ratto 22f51d1e75 moved autocorr to missing matlab econometrics toolbox [it is not in stats toolbox] 2016-05-19 14:34:09 +02:00
Marco Ratto 4445f17efa Manual merge with commit history of metropolis_hastings_initialization.m and random_walk_metropolis_hastings_core.m 2016-05-19 14:34:09 +02:00
Marco Ratto 357e3c2ac7 Make posterior_sampler_initialization.m compatible with new form of prior_draw.m 2016-05-19 14:34:09 +02:00
Marco Ratto 8e751be5ee bug fix for non integer Nc 2016-05-19 14:34:09 +02:00
Marco Ratto e69c5f6864 Bug fix for odd Nc 2016-05-19 14:34:09 +02:00
Marco Ratto 8bd963de64 Fill in posterior_mode with info from posterior samples. 2016-05-19 14:34:09 +02:00
Marco Ratto b830805cb6 Trap empty d [e.g. from slice sampler] 2016-05-19 14:34:09 +02:00
Marco Ratto a96dd5b964 for slice, always initialize empty invhess unless a new chain is initialized from a mode file 2016-05-19 14:34:09 +02:00
Marco Ratto 9089fc340c Initialize posterior_sampler_options. 2016-05-19 14:34:09 +02:00
Marco Ratto 46908d20c6 Provisions for new posterior sampler routines that factorize the individual iteration of individual samplers.
I contains a quick fix to adaptive_posterior_sampler.m, which cannot be embedded in the new structure.
2016-05-19 14:34:09 +02:00
Marco Ratto c30b6f20a6 Added routines that factor out posterior samplers into the iteration routine posterior_sampler_iteration.m.
It generalizes the random_walk_metropolis_hastings.m structure but adds two new items:
- check_posterior_sampler_options.m which is a wrapper for method specific options (stored in options_.posterior_options)
- posterior_sampler_iteration.m which is a wrapper of the individual iteration of any posterior sampler.

It already embeds, with parallelization implementation:
- random_walk metropolis hastings
- independent metropolis hastings
- slice sampler

It also contains a quick fix for TARB, although the latter should be embedded in posterior_sampler_iteration.m as well.

Any new posterior sampler can be simply added to posterior_sampler_iteration.m, with  wrapper to specific iterations in check_posterior_sampler_options.m
2016-05-19 14:34:09 +02:00
Marco Ratto b1b901fc61 Added SLICE sampler core routines 2016-05-19 14:34:09 +02:00
Marco Ratto 951dfe8ff4 When mh_posterior_mode_estimation, trap cases where the prior mode is at the boundary. 2016-05-19 14:34:09 +02:00
Marco Ratto a3ab6de6c8 Added function to compute of inefficiency factors, used in McMCDiagnostics.m
Requires missing autocorr (available in some MATLAB toolboxes).
Requires factor out CutSample in dynare_estimation_1.m
2016-05-19 14:34:09 +02:00
Houtan Bastani 58eb60c95d fix copyright dates, headers 2016-05-18 15:06:49 +02:00
Houtan Bastani 6a0de7a724 Merge pull request #1189 from rattoma/gsa
gsa and identification fixes
2016-05-18 15:01:19 +02:00
Johannes Pfeifer c05c66cbaa Filter out error code 6 in dsge_var_likelihood.m
Crashes otherwise
2016-05-17 20:56:25 +02:00
Marco Ratto 42170c6c13 Fixes around models with unit roots. 2016-05-17 11:47:07 +02:00
Marco Ratto c9bc685049 Fix determination of full rank subspace of simulated moment uncertainty 2016-05-17 09:38:06 +02:00
Marco Ratto f0b346b397 added waitbar, to monitor computations [especially useful for large models] 2016-05-17 08:41:55 +02:00
Marco Ratto 7c8878c071 Allow neighborhood_width sampling in Morris + bug fix. 2016-05-17 08:41:16 +02:00
Marco Ratto 28aeb9f308 bug fix 2016-05-17 08:40:32 +02:00
Houtan Bastani 5723e7ea58 build system: remove support for 32-bit Matlab on OS X 2016-05-13 10:53:55 +02:00
Houtan Bastani 89667ea8da remove unused file. closes #1172 2016-05-11 15:12:27 +02:00
Michel Juillard 31f8d61586 make estimation honor steady state nocheck option 2016-05-10 15:54:11 +02:00
Houtan Bastani ccb197e74f fix copyright dates 2016-05-09 12:42:58 +02:00
Michel Juillard 5e5157e375 loglinear: bug correction 2016-05-06 10:12:12 +02:00
Michel Juillard 67ea280773 adding missing semi-colon 2016-05-06 10:11:53 +02:00
Michel Juillard ef232ac436 fixed log_variable function 2016-05-05 20:53:22 +02:00
Michel Juillard 3c7c2f46a4 more fixes for loglinear with lead/lagged exogenous variables 2016-05-05 20:41:02 +02:00
Michel Juillard 7e13fe5ef7 fix loglinear option with leaded or lagged exogenous variables 2016-05-05 20:41:02 +02:00
Stéphane Adjemian e07d97a16e Merge pull request #1186 from rattoma/gsa
gsa and identification fixes
2016-05-05 19:19:10 +02:00
Marco Ratto 1b769d1d5f 1) fixed bug with initialization of infox
2) distinguish between no solution (iwrong index) and violation of prior restrictions (inorestriction)
3) smirnov tests for indeterminacy and explosive roots should be done EXCLUDING no solution cases
2016-05-05 16:53:18 +02:00
Marco Ratto 8e1d225832 Allow to perform neighborhood_width sampling around calibrated values; 2016-05-05 16:18:17 +02:00
Marco Ratto 0e402fa7e9 Filter out cases where too few samples are available for ANOVA estimation 2016-05-05 16:11:53 +02:00
Marco Ratto 8b54354a27 Make identification compliant with calibration parameter set [bug fix] 2016-05-05 16:08:14 +02:00
Houtan Bastani bebcfffe04 fix license, file copyright errors 2016-05-04 16:30:16 +02:00
Houtan Bastani 25121bca4f fix copyright dates 2016-05-04 16:05:31 +02:00
Johannes Pfeifer b364dd1d4c Account for Matlab 2016a in installer and mex-folder
Note that 32bit is not supported anymore

(cherry picked from commit e37b32b01534ffe9a5a5ec3f00f745720b75a83f)
2016-05-04 11:12:35 +02:00
Stéphane Adjemian (Charybdis) 6593c433f3 Revert "Account for Matlab 2016a in installer and mex-folder"
This reverts commit 6072aa0b46.
2016-05-03 22:20:10 +02:00
Johannes Pfeifer 6072aa0b46 Account for Matlab 2016a in installer and mex-folder
Note that 32bit is not supported anymore

(cherry picked from commit e37b32b01534ffe9a5a5ec3f00f745720b75a83f)
2016-05-03 15:24:23 +02:00
Johannes Pfeifer c48a2659e5 Fix warning message that confused structural shocks with measurement errors 2016-05-01 17:52:57 +02:00
MichelJuillard 6eb2e43432 Merge pull request #1171 from JohannesPfeifer/discretionary_policy
discretionary_policy_1.m: keep state space fixed even if state variab…
2016-04-18 22:17:42 +02:00
Johannes Pfeifer d1735e1d9e discretionary_policy_1.m: keep state space fixed even if state variable gets coefficient of 0 in solution by including appropriate 0 column. (Thanks to Junior Maih)
Reverts 3b64c37cb3
2016-04-18 21:48:28 +02:00
Michel Juillard e8c430a923 replaced transtion_matrix.m by kalman_transition_matrix.m 2016-04-16 17:21:42 +02:00
MichelJuillard 3d6c184566 Merge pull request #1168 from JohannesPfeifer/filter_tests
Improve speed of filtering unit tests and clean up setting of options
2016-04-15 09:50:49 +02:00
MichelJuillard a047b42dd3 Merge pull request #1167 from JohannesPfeifer/shock_decomp_fix
Add missing deblank to fieldname setting in shock_decomposition.m
2016-04-15 09:50:39 +02:00
MichelJuillard a21aa064c9 Merge pull request #1166 from JohannesPfeifer/kalman_fixes
Kalman fixes
2016-04-15 09:50:25 +02:00
Johannes Pfeifer c509f6d463 Add missing deblank to fieldname setting in shock_decomposition.m 2016-04-15 09:41:38 +02:00