Commit Graph

85 Commits (7dd2dd5e24a343fbeaf3522ea5e535c27d8b9f95)

Author SHA1 Message Date
Sébastien Villemot 10af04c6d8
Use Unicode copyright symbol (in UTF-8 encoding) in all source files
It is now supported by the MATLAB editor (as of R2022a).

The old ASCII notation is left in some files that we copy as-is from other
sources (e.g. in the contrib/ and m4/ subdirectories).

The particles submodule is not updated at this point, because it is in an
inconsistent state.

[skip ci]
2022-04-13 14:54:25 +02:00
Sébastien Villemot 766fff88f6
Use secure URL for link to GNU licenses 2021-06-09 17:35:05 +02:00
Johannes Pfeifer 312d053ae1 Use LaTeX labels in figures 2020-06-17 21:48:25 +02:00
Houtan Bastani 3d9fe36ec5
ignore unused return value
[skip ci]
2020-02-25 14:50:56 +01:00
Houtan Bastani 54fe1c754c
fix typo in variable name 2020-02-25 14:50:55 +01:00
Sébastien Villemot 87bb0c6997 Fix mistake in previous commit w.r.t. steadystate file 2018-06-27 17:15:13 +02:00
Sébastien Villemot a1b8bd39b2 Move the location of various generated files on the filesystem
- M and MEX files are now under +${MODELNAME}/
- bytecode, C source and JSON now under ${MODELNAME}/model/
2018-06-27 17:03:39 +02:00
Stéphane Adjemian (Scylla) 7be8f10e0e Use cells of strings instead of char arrays. 2018-01-09 22:30:01 +01:00
Johannes Pfeifer 818a07a4ef Fix get_posterior_parameters
Get rid of setting variables from the base workspace in the function, making the function read-only (as the name suggests)
2017-10-05 09:54:08 +02:00
Houtan Bastani 718ff3d61c preprocessor: only create *set_auxiliary_variables.m file if there will be something in it. Closes #1384 2017-08-29 14:44:52 +02:00
Stéphane Adjemian (Charybdis) 5417b27ac7 Fixed indentation of matlab files. 2017-05-16 15:10:20 +02:00
Stéphane Adjemian (Charybdis) a53636e24e Fixed copyright notices. 2017-05-16 14:11:15 +02:00
Stéphane Adjemian (Charybdis) 88e1701289 Removed useless commas and semicolons. 2017-05-16 13:24:46 +02:00
Stéphane Adjemian (Charybdis) 85fe69b265 Cosmetic change (use logicals). 2017-03-20 11:39:22 +01:00
Johannes Pfeifer 9abac8ccdb Store indicator whether smoother was used with loglinear
Required to keep track of whether estimates were logged. Related to #1407
2017-03-20 11:36:10 +01:00
Marco Ratto 2b28ba70d9 Make remote parallel computation compatible with new steadystate and auxiliary variable files 2017-03-18 17:28:44 +01:00
Stéphane Adjemian (Charybdis) e71ed1bad6 Partially revert f70f45d1271e716498a8761a8e8476f54da3607d. Do not discard repetitions. 2017-03-18 00:06:15 +01:00
Marco Ratto e180e2f075 1) fixed while for b index
2) ensure there are no repeated draws in sub-draws;
3) speed-up subdraw sampling when all retained draws are used.
2017-03-18 00:06:15 +01:00
Marco Ratto a68e958cf7 As agreed in #1375, moved treatment of filtered_vars in dynare_estimation_init.m 2017-03-17 15:43:00 +01:00
Marco Ratto 4f93c3df15 proper use of varlist in smoothed variables + sort in alphabetic order to find more easily plots for large numbers of variables. 2017-03-17 15:43:00 +01:00
Marco Ratto 4b2d139c7a - store oo_.FilteredVariablesKStepAheadVariances only if options_.filter_covariance. this can save a lot of memory for large models
- oo_.FilteredVariables must be stored independently to a previous MCMC. evaluate_smoother must in any case provide full info in oo_
- options_.filtered_vars does not always imply filtered variables are computed. options_.nk is more robust.
2017-03-17 15:43:00 +01:00
Johannes Pfeifer e815c2b4db Output UpdatedVariables in oo_ without filtered_variables
Makes it consistent with manual and closes #1366
2017-01-04 10:57:00 +01:00
Johannes Pfeifer 3ebc982b02 Add state_uncertainty to Bayesian smoother 2016-11-04 09:23:55 +01:00
Johannes Pfeifer bf725787e6 Only generate forecast with measurement error if observed variables are requested 2016-08-23 17:22:41 +02:00
Johannes Pfeifer 7050cab9c9 Consider measurement error for uncertainty bands in Bayesian estimation 2016-08-23 17:22:41 +02:00
Johannes Pfeifer 3b09ab5424 Save Smoother.Trend and Smoother.Constant after MCMC 2016-06-16 12:05:38 +02:00
Johannes Pfeifer 5d6d1336ef Enable filter_covariance option in posterior sampling 2016-06-16 12:05:38 +02:00
Johannes Pfeifer 12ee5b7276 Fix copyrights and references to random_walk_metropolis_hastings headers 2016-05-19 17:15:31 +02:00
Houtan Bastani 25121bca4f fix copyright dates 2016-05-04 16:05:31 +02:00
Johannes Pfeifer df1c7fce8a Do not condition handing over of observable index on requesting forecasts
Already the smoother uses them due to potential trends being present
2016-03-23 10:35:58 +01:00
Johannes Pfeifer fb20b464d4 Remove bayestopt_.mean_varobs and use dataset_info instead
Closes #255
2016-03-23 10:31:09 +01:00
Johannes Pfeifer f64b76f0d3 Move saving of data mean to data initialization instead of posterior computations
Makes it accessible for other functions that also need it
2016-03-23 10:10:41 +01:00
Johannes Pfeifer b4941c02d3 Cosmetic Fixes to Metropolis-Hastings routines
- Adds comments and headers and fixes typos in previous ones
- Make naming in random_walk_metropolis_hastings_core.m more intuitive
2015-04-25 19:28:16 +02:00
Johannes Pfeifer d4c0726026 Fix size of filtered variables matrix
Fixes crash occurring due to non-conformable matrices
2015-03-12 10:49:33 +01:00
Johannes Pfeifer 45ef721d03 Fix computation of SmoothedMeasurementErrors in Bayesian smoother 2014-11-16 21:08:18 +01:00
Johannes Pfeifer 5062f2ec7b Fix length of stored and plotted forecasts for Bayesian estimation
It stored the initial condition(s) in addition to the forecasts for the specified horizon. In plots, the first point was actually not the forecast, but the initial condition. This contrasted with the behavior or ML and recursive Bayesian forecasts. Now the stored and plotted forecasts always have the first forecast horizon as the first entry/data point
2014-11-16 21:08:17 +01:00
Stéphane Adjemian (Scylla) 11f00d041e Fixed bug (options_.varobs is a row cell array of strings) + Cosmetic changes. 2014-06-23 12:53:39 +02:00
Stéphane Adjemian (Scylla) 195a3f8fff Fixed bug (missing transposition). 2014-06-23 12:52:44 +02:00
Stéphane Adjemian (Charybdis) 880bb58aef Fixed mode_check and prior_posterior_statistics routines (added dataset_info as an input). 2014-06-17 10:19:07 +02:00
Stéphane Adjemian (Scylla) 66d08ac3bf Merge branch 'master' into use-dynSeries
Conflicts:
	matlab/dynare_estimation_init.m
	matlab/global_initialization.m
	matlab/prior_posterior_statistics.m
	matlab/read_variables.m
	matlab/set_prior.m
	matlab/utilities/dataset/initialize_dataset.m
	preprocessor/ComputingTasks.cc
2014-04-30 10:10:30 +02:00
Stéphane Adjemian (Scylla) 63986a0ebf Closes #567. 2013-12-18 16:44:31 +01:00
Stéphane Adjemian (Scylla) 4a4c06b781 Fixed bug (options_.subdraws does not exist). 2013-12-18 16:44:31 +01:00
Johannes Pfeifer cd3b5bf3d9 Fix bug in Bayesian estimation where the filter_step_ahead command produced no output
- Improves documentation of resulting matrices
- Adds unit test for filter_step_ahead option
2013-12-11 16:43:15 +01:00
Stéphane Adjemian (Scylla) d52a0d2c89 Changed the logic for mh-history files (keep track of all the previous estimations if load_mh_file is used). Various bug fixes and cosmetic changes. 2013-11-20 18:03:12 +01:00
Stéphane Adjemian (Charybdis) 907e087ea9 Consider options_.varobs as a cell of strings. 2013-09-07 16:39:04 +02:00
Marco Ratto ad34f3dbf1 Fixed bugs related to the case where no shock standard deviation is estimated 2013-04-18 19:36:41 +02:00
Johannes Pfeifer c071df7f78 Clarify terminology used for filtered variables
Closes #317
2013-04-10 10:44:24 +02:00
Johannes Pfeifer 7518072e77 Fix several bugs related to estimated measurement errors
1. The first call to set_prior overwrote the first column of
estim_params_.var_endo storing the position of the variable with
measurement error in M_.endo_names with the position in
options_.var_obs. All subsequent calls to set_prior then lead to
crashes.
2. At the same time, for correlations of ME, the first column of
estim_params_.corrn still stored the position of the variable with
measurement error in M_.endo_names. But subsequent calls to it were done
as if it stored the position in options_.var_obs

I introduced two new variables in estim_params_ storing the respective
positions in var_obs so as to not necessitate changes in the
preprocessors.

3. For cases of calibrated measurement error correlations, the
covariance matrix was not updated.

4. Fixing a lot of smaller bugs related to measurement errors, including
some copy and paste errors
-
2013-03-21 20:51:12 +01:00
Sébastien Villemot 1f9cea669a Update copyright notices 2012-06-08 18:22:34 +02:00
Marco Ratto 4480f5b494 Fixes around latex output: use of longtable for parameter estimates and various fixes for posterior analysis, also for parallel execution. 2012-05-30 11:22:59 +02:00