b8a02d4484
Renamed record.InitialLogLiK as record.InitialLogPost.
2013-11-26 12:16:31 +01:00
f2f072bce1
Added options to the internals command to load mh-history files or display informations about MCMC settings and state.
...
For instance, assuming that fs2000a.mod is in the current Matlab/Octave's directory and that a metropolis has been run,
the following command:
>> internals --display-mh-history fs2000a
produces the following output in the Matlab/Octave's command window:
================================
MCMC set-up for fs2000a mod file
================================
MCMC chain number 1:
--------------------
o Number of MCMC files is 1
o Number of draws is 6000
o Acceptance ratio is 35.28%
o Last value of the posterior kernel is: 1221.81656
o State of the chain:
|| Initial | Current
++++++++++++++++++++++++
e_a || 0.01570 | 0.01608
e_m || 0.00528 | 0.00512
alp || 0.35026 | 0.36909
bet || 0.99300 | 0.99308
gam || 0.00086 | 0.00038
mst || 1.00088 | 1.00147
rho || 0.65926 | 0.71132
psi || 0.66428 | 0.60611
del || 0.00977 | 0.00198
MCMC chain number 2:
--------------------
o Number of MCMC files is 1
o Number of draws is 6000
o Acceptance ratio is 33.38%
o Last value of the posterior kernel is: 1220.39229
o State of the chain:
|| Initial | Current
+++++++++++++++++++++++++
e_a || 0.01664 | 0.01576
e_m || 0.00489 | 0.00504
alp || 0.39701 | 0.36630
bet || 0.99305 | 0.99219
gam || 0.00067 | -0.00025
mst || 1.00186 | 1.00218
rho || 0.70060 | 0.63847
psi || 0.65623 | 0.74668
del || 0.00666 | 0.00842
while the command:
>> internals --load-mh-history
loads the content of the record structure (saved in the last mh-history file) in Matlab/Octave's workspace
under the name mcmc_informations.
2013-11-26 11:28:40 +01:00
dd1a9aaee6
utilities: fixed name2tex regexprep for octave
2013-11-25 06:37:15 +01:00
27181a26d5
load_csv_file_data: fix isdate test
2013-11-25 06:15:35 +01:00
7af47e1e9f
dseries: change default to not use sub operator on latex
2013-11-22 17:55:57 +01:00
69caa7ec03
reporting: replace format with date2string
2013-11-22 17:45:15 +01:00
afacf27268
reporting: replace getDatesCellStringArray with strings
2013-11-22 17:21:53 +01:00
938751fa60
reporting: replace .time with .dates
2013-11-22 17:14:29 +01:00
70e8f48afd
reporting: replace occurrences of dynDate with dates
2013-11-22 17:11:57 +01:00
43f11de27b
Merge branch 'master' into fix-mcmc-algorithm
2013-11-22 16:56:23 +01:00
817060c954
Added unitary test for name2tex routine.
2013-11-22 16:53:02 +01:00
d02171080c
Rewrote name2tex routine and fixed bug.
2013-11-22 16:53:02 +01:00
1fe3e4bc77
Cosmetic change.
2013-11-22 16:53:02 +01:00
da6e0fd096
Make sure that index is an integer in GetPosteriorMeanVariance.m
2013-11-22 14:53:50 +01:00
f14aed8f6a
Removed check_presence_consecutive_MC_files in McMCDiagnostics. Cosmetic changes.
2013-11-22 11:28:24 +01:00
a65197f273
Fixed bug (missing output argument).
2013-11-22 11:13:49 +01:00
29850cf2c5
Merge pull request #541 from JohannesPfeifer/typo_use_calibration
...
Fix typo in use_calibration
2013-11-21 14:23:32 -08:00
ebe816e0ca
Merge pull request #540 from JohannesPfeifer/fix_parameter_updating
...
Fixed typo that prevented correct updating of parameters when using resi...
2013-11-21 14:22:35 -08:00
d935751c18
Fix typo in use_calibration
2013-11-21 21:19:29 +01:00
23bd54ce72
Fixed typo that prevented correct updating of parameters when using resid together with the steady_state_model block
2013-11-21 19:39:50 +01:00
c0aaabc329
Merge branch 'master' into fix-mcmc-algorithm
2013-11-21 15:42:58 +01:00
1393564701
Fixed bug of unknown origin...
2013-11-21 15:24:35 +01:00
1ef53c1d6a
Solve backward compatibility issues for mh-history files. Fixes #537 .
2013-11-21 12:41:25 +01:00
d52a0d2c89
Changed the logic for mh-history files (keep track of all the previous estimations if load_mh_file is used). Various bug fixes and cosmetic changes.
2013-11-20 18:03:12 +01:00
4f87313ed6
fix comment
2013-11-19 13:47:28 +01:00
7abcd5bcb1
preprocessor: bug fix: return oo
2013-11-19 11:56:39 +01:00
aa0af5e556
proprocessor: block code bug fix: M and oo not being passed to solve_two_boundaries
2013-11-19 11:54:00 +01:00
f908d64d9e
Removed unused variable.
2013-11-17 16:37:53 +01:00
450c785b6c
Added explicit error message for case 52 in print_info (DSGE-VAR models).
2013-11-16 23:35:10 +01:00
ad0c29262b
Cosmetic. Renamed DsgeVarLikelihood as dsge_var_likelihood.
2013-11-16 23:33:37 +01:00
9238523c26
If a DSGE-VAR is estimated, check that the user do not try to estimate/calibrate correlations between structural innovations and that there is no measurement errors. Closes #521 .
2013-11-16 23:26:19 +01:00
0a4427af27
Fixed bug in simplex_optimization_routine (simplex -> options).
...
Closes #536 .
2013-11-16 20:22:37 +01:00
c8d77b204c
Rewrote the header documentation of simplex_optimization_routine.
2013-11-16 20:13:08 +01:00
49def96bed
Removed bayestopt_ as a global from simplex_optimization_routine.
2013-11-16 20:12:39 +01:00
7cfad8eee0
Merge branch 'master' into remove-dynDate-class
2013-11-15 18:36:10 +01:00
b99db45707
Fixed bug (dynare path has to be defined sooner, otherwise isoctave is unknown in warning_config).
2013-11-15 17:03:58 +01:00
ddf90fb769
Merge pull request #533 from JohannesPfeifer/master
...
Fix bug when datafile was changed and nobs resulting from old dataset wa...
2013-11-15 07:52:51 -08:00
530ad8e2d8
Fix bug when datafile was changed and nobs resulting from old dataset was bigger than is possible in new dataset
2013-11-15 16:47:25 +01:00
2009d7bc66
Added overloaded plot function for dseries objects.
2013-11-15 15:28:19 +01:00
7cef9c4dfa
Fixed unitary tests in @dseries/ydiff.
2013-11-14 18:02:42 +01:00
683861396c
Fixed unitary test in @dseries/subsref.
2013-11-14 17:58:09 +01:00
0c00151092
Merge branch 'master' into remove-dynDate-class
...
Conflicts:
preprocessor/DynareBison.yy
2013-11-14 16:41:08 +01:00
e36516f766
Same as commit #92adc85d04217c05af1288bb77806ed9c73fd85f for ygrowth and ydiff methods.
2013-11-14 14:30:19 +01:00
61cf9899e1
Fixed bug (dates member was not updated).
2013-11-14 14:29:29 +01:00
98dde877ab
Cosmetic changes.
2013-11-14 13:43:31 +01:00
18749508e4
Fixed bug in @dseries/save.
...
The default value of the file name (without extension) was wrong when the method was called with the dot notation.
2013-11-14 12:55:11 +01:00
92adc85d04
Change renaming of the variables to be more consistent (qgrowth(X) instead of QGROWTH_X).
2013-11-14 10:04:10 +01:00
400a4da434
Access the @dseries/pop method with dot notation. Fixed bug.
2013-11-14 00:13:31 +01:00
824d1ed74d
Cosmetic changes in unitary tests for @dseries/mtimes (initialize t in the try/catch block).
2013-11-14 00:03:34 +01:00
844936cdc4
Fixed bug (wrong calling sequence to isdseries function).
2013-11-14 00:02:17 +01:00
d56ae08ccc
Changed behaviour of @dseries/pop method. If only one argument is provided, remove the last variable.
2013-11-13 22:10:50 +01:00
80a2a6b712
Merge remote-tracking branch 'jpfeifer/irf_debug_feedback'
2013-11-13 14:26:58 +01:00
0d97252570
Fixed bug in @dseries/insert method when more than one variable has to be inserted.
2013-11-13 12:16:37 +01:00
b38082c558
Fixed header.
2013-11-13 12:15:02 +01:00
e0c4c937f3
Fixed bug (vobs member was not updated).
2013-11-13 11:24:27 +01:00
b43bfec85f
Fixed typos.
2013-11-13 11:24:01 +01:00
280825a3ca
Access the @dseries/insert method with dot notation.
2013-11-13 11:00:22 +01:00
6d4b6f6e67
Added missing unitary tests in the testsuite.
2013-11-13 10:59:44 +01:00
9dd03751e2
Changed generated plots in unitary tests.
2013-11-12 18:42:07 +01:00
7c91adadd5
Changed density (1200dpi->300dpi) for pdf, png and jpg outputs.
2013-11-12 18:19:37 +01:00
14f306a0cf
Fixed typos.
2013-11-12 17:19:33 +01:00
1046089cef
Rewrote @dseries/extract method.
2013-11-12 16:52:51 +01:00
63eec83efe
ms-sbvar: add load_flat_file.m. closes #505
2013-11-12 15:48:15 +01:00
ea6ee19402
More Octave compatibility fixes wrt catch
2013-11-08 16:35:52 +01:00
ecdbc42319
Fix error message when initial values of estimation are not suitable.
...
Ref #512
2013-11-08 16:09:16 +01:00
9a72beceed
Removed some restrictions in @dseries/eq overload operator: the variables in the compared dseries object need not to have the same names.
2013-11-08 15:19:13 +01:00
179af0e4ab
Octave compatibility fix: catch does not accept an argument
2013-11-08 15:02:30 +01:00
1d939bf685
Fixed typo.
2013-11-08 14:21:05 +01:00
0333629cb9
Changed x-labels in plot (with dates). Added commands for saving the generated plot in the unitary test of @dseries/baxter_king_filter.
2013-11-08 14:20:43 +01:00
bcb6b5293a
Fixed error messages in @dseries/align.
2013-11-08 09:45:10 +01:00
69525be77f
Fixed bug in @dseries/align (update dates member of the second input argument).
2013-11-08 09:44:34 +01:00
f2b75aa3b3
Fix typo in model_diagnostics.m
2013-11-08 08:27:29 +01:00
b9af2f31fb
Fixed bug appearing if FREQ__ is not specified but INIT__ is (wrong default). Note that we never need to specify FREQ__ which is deduced from INIT__.
2013-11-07 15:03:18 +01:00
a0da47758f
Filters out error due to model being purely static.
...
First step in #526
2013-11-07 10:22:24 +01:00
57b33889bb
Fix typo in field naming
2013-11-07 07:59:12 +01:00
34e5f48752
Use isdseries and fixed bug introduced in commit fbb38d5576.
2013-11-06 22:43:43 +01:00
fbb38d5576
Renamed time member as dates (in dseries class) to avoid confusion with dates class' time member.
2013-11-06 17:41:11 +01:00
805d4dda67
Added isdseries routine. Returns 1 if the input is a dseries object, 0 otherwise.
2013-11-06 17:15:19 +01:00
92679a463f
Check that the second input is a dseries object in @dseries/merge.
2013-11-06 16:59:32 +01:00
4a2a9af021
Removed useless condition.
2013-11-06 16:56:21 +01:00
cecd56e457
Renamed getDatesCellStringArray routine as strings. Factorized code.
2013-11-06 14:53:36 +01:00
0fdc18e7fb
Merge branch 'ifc'
...
Conflicts:
matlab/dynare_estimation_1.m
matlab/global_initialization.m
2013-11-06 13:58:57 +01:00
b03697b342
Add possibility to initialize parameters from calibrated model
2013-11-06 13:50:46 +01:00
8429321547
Merge branch 'master' into remove-dynDate-class
2013-11-06 12:43:06 +01:00
7e779ed506
Removed debugging info in unitary test.
2013-11-06 10:58:59 +01:00
e6a18c8209
Added checks for octave and matlab version.
...
Behaviour of unique has changed after R2012b. We force the old behaviour to keep compatibility with Octave's implementation of the unique function.
Also removed useless condition.
2013-11-06 10:47:24 +01:00
1f80af75c1
Rewrote header.
2013-11-06 10:01:47 +01:00
71045299a4
Rewrote @dates/union more compactly (code factorization).
2013-11-06 09:42:18 +01:00
1ac115ac2b
Fixed typo in header.
2013-11-06 09:16:40 +01:00
e4ae889886
Cosmetic change.
2013-11-06 08:39:55 +01:00
f98ef6b3fb
Rewrote header and removed useless condition.
2013-11-06 08:39:06 +01:00
8dc13c12d8
Add missing function check_for_calibrated_covariances.m
2013-11-06 07:13:35 +01:00
a72cc3ff48
Merge remote-tracking branch 'github/master'
2013-11-05 17:17:53 +01:00
d6a6c42054
Removed useless condition (first argument has to be a dates object).
2013-11-05 17:00:02 +01:00
ead332ed97
Merge pull request #511 from JohannesPfeifer/Correlated_errors_preprocessor
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Bugfixes for correlated shocks
2013-11-05 07:49:37 -08:00
7e70af88a9
Removed useless condition (first argument has to be a dates object).
2013-11-05 16:28:23 +01:00
9795edd892
Removed useless condition (first argument has to be a dates object).
2013-11-05 16:27:16 +01:00
e8be29e97c
Removed comments.
2013-11-05 16:26:16 +01:00
8a6e23845b
Merge remote-tracking branch 'jpfeifer/mode_compute'
2013-11-05 16:20:04 +01:00
fddee8e1db
Bugfixes for correlated shocks
...
Uses preprocessing capabilities introduced in 07137e804bFixes #392 and #494 . Also fixes a bug in the checking for positive definiteness of covariance matrices in likelihood functions
Allows for calibrated covariances by reading them out and setting them after covariance matrix has been reconstructed from correlation and variances.
Adds unit test
2013-11-05 15:55:29 +01:00
be983fa363
Merge pull request #518 from JohannesPfeifer/check_covariance
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Add function to check covariances for consistency
2013-11-05 06:42:08 -08:00
68a33a76d8
Add function to check covariances for consistency in stochastic simulations
2013-11-05 15:36:06 +01:00
42453b4887
Rewrote @dates/min function more compactly (as in commit 88389316fa).
2013-11-05 14:46:00 +01:00
ac8303ed59
dynSeries: add possibility to merge with an empty series
...
adding comments
2013-11-05 12:46:30 +01:00
88389316fa
Rewrote more compactly @dates/max function.
2013-11-04 19:21:00 +01:00
8568292fcd
Fixed bug that pops up when adding an empty dates object with a non empty dates object.
2013-11-04 19:13:53 +01:00
d8f1201a84
Fixed bug (undefined object).
2013-11-04 19:12:17 +01:00
0d669a73cb
Add options for providing the variances, an identity matrix , and user specified matrices as proposal densities
...
Deals with #507 and #112
Includes a unit test
2013-11-04 19:09:24 +01:00
8f93af16e1
Added method likecode for @dates/length.
2013-11-04 18:26:45 +01:00
a88a7a0ac5
Added method like call for @dates/isempty.
2013-11-04 18:02:15 +01:00
1a8bba6393
Allow a custom function named 'prior' as a value for 'mode_compute' option
...
Closes #507
2013-11-04 15:42:59 +01:00
2078e06b16
Take care of matlab's version when using builtin intersect function.
2013-11-04 10:55:46 +01:00
ddd95361ba
Cosmetic changes. Added isoctave function to replace exist('OCTAVE_VERSION').
2013-11-04 10:54:45 +01:00
7518a46de0
Fixed bug. Function isdates should not be located in @dates folder, otherwise the function is not found if the input argument is not a dates object (which makes the function useless).
2013-11-04 08:18:18 +01:00
b81159f12c
adding comments
2013-11-03 11:40:36 +01:00
8282e76d61
Add more explicit information in case of singularity problem
2013-10-31 08:14:35 +01:00
63f8a731d9
Cosmetic changes.
2013-10-30 09:32:51 +01:00
6b09ef8760
Take care of user-supplied function by checking whether mode_compute is numeric
...
Fixes #508
(cherry picked from commit 8ce11bc848
2013-10-28 18:58:40 +01:00
9df1b8548e
Merge branch 'master' into remove-dynDate-class
...
Conflicts:
matlab/reports/@report_series/getLine.m
matlab/reports/@report_series/write.m
matlab/reports/@report_table/report_table.m
matlab/reports/@report_table/write.m
2013-10-28 15:04:21 +01:00
8ce11bc848
Take care of user-supplied function by checking whether mode_compute is numeric
...
Fixes #508
2013-10-27 10:56:11 +01:00
70969e4e46
Use @dates/double as a method.
2013-10-24 14:55:37 +02:00
ed9babae26
Added missing constructor for dates of the form dates(DATES, DATES, DATES, ...).
...
Calls hozcat method.
2013-10-24 09:47:59 +02:00
901ab2758c
Fixed bug (dates constructor of the form dates(FREQ, YEAR, SUBPERIOD) when FREQ is given by a character).
2013-10-24 09:42:15 +02:00
4da6f10233
ms-sbvar: ms_simulation: add option to save mcmc draws
2013-10-23 17:03:52 +02:00
84dd46d9e5
Merge pull request #500 from JohannesPfeifer/conditiona_forecast_manual
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Fix variable name and document saving of conditional forecasts
2013-10-22 05:06:23 -07:00
6128338a15
Added missing tag for triggering the unitary tests in @dates/double.
2013-10-21 11:53:33 +02:00
d31a2674e8
Renamed dynDates2decimal as double, added doc/header and unitary tests.
...
The advantage of this change is that we can put dates in an array of
doubles. For instance, assuming that A is a 2*1 vector, the following
syntax is allowed:
A(1) = dates('1945Q3');
A(2) = dates('1938Q4');
Matlab/Octave calls the overload double function to convert the dates as
a double.
2013-10-21 11:50:21 +02:00
9a07e5c49d
Fixed unitary test.
2013-10-18 22:55:53 +02:00
d86d713cf4
Renamed dynSeries class as dseries.
2013-10-18 17:38:43 +02:00
0056751215
Fixed bug relatated with tex names.
2013-10-18 16:44:18 +02:00
600ae070fb
reporting: change series class name to report_series to avoid conflict with control systems toolbox function series
2013-10-18 15:20:44 +02:00
95fea041ef
reporting: fix typo
2013-10-18 15:20:44 +02:00
1b7d2e1d10
reporting: change table class name to report_table to avoid conflict with matlab function table
2013-10-18 15:20:38 +02:00
14640275d8
Cosmetic change.
2013-10-18 15:06:36 +02:00
ca04453e81
Fixed unitary test in @dynSeries/pop (bug caused by the change of behaviour of the eq method introduced in commit 5b59ff42b1).
2013-10-17 17:31:17 +02:00
8f3e10ea1b
Merge branch 'master' into remove-dynDate-class
2013-10-17 16:33:19 +02:00
b77d37d83b
Fixed typo in unitary tests numbering.
2013-10-17 16:30:35 +02:00
29cbe5dfb4
Added overloaded cumsum function for dynSeries objects.
2013-10-17 15:59:29 +02:00
1cf174bdb4
Fixed typo in error and warning messages.
2013-10-17 14:26:12 +02:00
f3a54ed79b
Added overloaded method @dynSeries/ne (~=) and @dynSeries/isequal function (reproduce old behaviour of the eq operator, changed in commit 5b59ff42b1).
2013-10-17 11:38:44 +02:00
5b59ff42b1
Changed behaviour of the overload eq (==) method for dynSeries objects (see header).
2013-10-17 11:37:15 +02:00
69f7e2468c
Fixed bug in display of the dynSeries objects.
2013-10-17 11:36:22 +02:00
bf733d50c4
Added missing semicolon.
2013-10-17 11:36:03 +02:00
a8a9ec1957
Fixed bug in the definition of init when extracting a subsample with a vector of integers.
2013-10-16 16:17:43 +02:00
66143e4749
dynDate -> dates in dynSeries.
2013-10-16 16:16:26 +02:00
529a94e329
Rewrote @dynSeries/horzcat method.
2013-10-16 15:51:07 +02:00
7de84a4767
Fixed typo.
2013-10-16 15:47:56 +02:00
08f693dffd
Added @dates/horzcat and @dates/vertcat methods. Added a function to test if an object is a dates object.
2013-10-16 15:24:42 +02:00
306d8d6f88
Fixed bug (wrong use of inputname function).
2013-10-16 14:56:23 +02:00
46db51b479
Updated @dynSeries/extract method.
2013-10-16 13:16:07 +02:00
Stéphane Adjemian (Scylla)
Houtan Bastani
Johannes Pfeifer
Sébastien Villemot
Sébastien Villemot
Michel Juillard