Commit Graph

66 Commits (4c1af7890bf2a1ea68a218f13890f2f6a2f1b66a)

Author SHA1 Message Date
Stéphane Adjemian (Guts) 5b72a3041c
Use new unit tests interface. 2023-01-02 22:58:20 +01:00
Sébastien Villemot 10af04c6d8
Use Unicode copyright symbol (in UTF-8 encoding) in all source files
It is now supported by the MATLAB editor (as of R2022a).

The old ASCII notation is left in some files that we copy as-is from other
sources (e.g. in the contrib/ and m4/ subdirectories).

The particles submodule is not updated at this point, because it is in an
inconsistent state.

[skip ci]
2022-04-13 14:54:25 +02:00
Johannes Pfeifer f09b048c8f inverse_gamma_specification.m: correct header
[skip CI]
2021-10-27 10:13:04 +02:00
Sébastien Villemot 766fff88f6
Use secure URL for link to GNU licenses 2021-06-09 17:35:05 +02:00
Johannes Pfeifer e92054e16b Move definition of prior distribution names to separate function to make it useable in other contexts. 2020-06-26 12:07:16 +02:00
Sébastien Villemot 6e0f104d7e
Bump minimal MATLAB version to R2014a
Ref. #1713
2020-04-07 16:32:32 +02:00
Sébastien Villemot 98bdf76581
MATLAB R2009b compatibility fixes
— use XLS instead of XLSX in testsuite datafiles
— use optimset instead of optimoptions
— use quadv/quadl/quadgk instead of integral
— fix race condition in load_m_file_data_legacy.m tests
— use fallback implementation for intersect(…, 'stable')
2019-11-15 18:27:37 +01:00
Sébastien Villemot 1f84bc051d
Under Octave, the "statistics" Forge package is now a requirement
The gamrnd fallback under matlab/missing/stats/ does not work under Octave
because the +gamrnd/ folder is not accessible (it has the same name as the
function, which does not work under Octave).

Instead of fixing this, rather make the statistics toolbox a requirement, since
anyways it is very easy to obtain under Octave.

Accordingly:
- do not try to run the unit tests of matlab/missing/stats/ under Octave
- merge the matlab/missing/stats-matlab/ into matlab/missing/stats/, since this
  directory is now MATLAB-only.

Also:
- move matlab/distributions/+gamrnd/ under matlab/missing/stats/ for
  consistency
- in the manual: remove obsolete link to Octave downloads on the Dynare
  website; update URL of Octave Forge

Closes #1638
2019-02-18 17:41:10 +01:00
Stéphane Adjemia (Scylla) d628b078ab
Fixed typo. 2018-12-15 16:48:24 +01:00
Stéphane Adjemia (Scylla) 4206cabe52
Streamlined gamrnd algorithms. 2018-12-15 16:48:24 +01:00
Stéphane Adjemia (Scylla) 8ac4860150
Fixed Weibull rejection algorithm.
The description given by Devroye (1986) is clearly wrong, this implementation
is based on the original paper Väduva (Series Statistics, 1977).
2018-12-15 16:48:24 +01:00
Stéphane Adjemia (Scylla) 79ad4e952b
Bug fixes in Cheng (1977)'s gamrnd algorithm.
- Definition of Y was wrong (error in Devroye's book).
 - Definition of X was wrong.

Also simplified the code w.r.t. update of the vector of indices.
2018-12-15 16:48:24 +01:00
Stéphane Adjemia (Scylla) 426c63a735
Created namespace for gamrnd routines.
Also fixed implementation of Jonk's algorithm.
2018-12-15 16:48:23 +01:00
Stéphane Adjemian(Charybdis) 0d27bd8dea Fixed unit tests on Weibull pdf (Octave testsuite).
(cherry picked from commit bc962a91c0749e6c9f108c867acde134e6bb80fc)
2018-07-17 17:44:15 +02:00
Stéphane Adjemian(Charybdis) 4154817acc Added missin semicolons.
(cherry picked from commit 4a0b1c2e93d23c85a7874b1bbea85819f56739f5)
2018-07-17 17:43:58 +02:00
Johannes Pfeifer 93668809a6 Clarify inverse_gamma_specification.m 2017-09-18 17:27:15 +02:00
Stéphane Adjemian (Charybdis) 1bf81c9f5a Fixed copyright notices. 2017-05-18 18:36:38 +02:00
Stéphane Adjemian (Charybdis) 5417b27ac7 Fixed indentation of matlab files. 2017-05-16 15:10:20 +02:00
Stéphane Adjemian (Charybdis) a53636e24e Fixed copyright notices. 2017-05-16 14:11:15 +02:00
Stéphane Adjemian (Charybdis) 88e1701289 Removed useless commas and semicolons. 2017-05-16 13:24:46 +02:00
Johannes Pfeifer 875497bc71 Unit test lpdfgweibull.m: adjust upper integration bound under Octave
Does not correctly integrate otherwise as more than 99% of support is 0
2017-01-18 11:01:13 +01:00
Johannes Pfeifer ca1c6ecc0e Increase test tolerance under Octave for lpdfgweibull.m 2016-11-24 11:50:21 +01:00
Johannes Pfeifer fccd164926 Provide lower tolerance to Octave's quadv function as integration otherwise stops prematurely 2016-11-10 17:33:18 +01:00
Houtan Bastani 710e8ef3a5 fix copyright dates for 2016 2016-02-23 14:04:04 +01:00
Stéphane Adjemian (Hermes) 0459d1bcd4 Fixed bug in Weibull prior.
Fixed inconsistencies in the ordering of the hyperparameters (shape and scale).
2016-02-11 21:35:29 +01:00
Stéphane Adjemian (Charybdis) d9cb5da148 Added unit test. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 32475c90b0 Fixed typo in unit test. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 1a07f95218 Fixed bug in the unit test for the mode of beta density. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 0a4b9bfb3d Added missing semicolon. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 09498d30eb Updated header doc. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 3c42f7e362 Added try-catch blocks in unit tests. 2015-12-11 18:50:54 +01:00
Johannes Pfeifer 8c9736f93f Add unit tests for compute_prior_mode.m
(cherry picked from commit 7d9c3ee365aba25c131b423596a1446eafd9c6ec)
2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 09b4928ca8 Added lower bound as an argument. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) cfefa6951c Changed inputs of inverse_gamma_specification routine and added unit tests. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 85a4a082ad Added a routine for computing the hyperparameters of the Beta distribution from the expectation and the variance (with unit tests). 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 24848a2ba4 Added a routine for computing the hyperparameters of the Gamma density from the expectation and the variance (with unit tests). 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 02d53b5d1d Use statistics toolbox if available for the Weibull inverse CDF. 2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 5fb1b1cc23 Added Weibull prior. 2015-12-04 14:50:44 +01:00
Johannes Pfeifer 19fdb309ac Fix computation of prior mode for uniform distribution
While this code is never actually used, we return the prior mean, which is directly given by the first hyperparameter.
2015-07-27 10:19:02 +02:00
Johannes Pfeifer b67e9626f7 Add more information to header of rand_multivariate_student.m 2015-05-10 10:06:42 +02:00
Stéphane Adjemian (Telemachus) 8fedac4d5e Replaced calls to dyn_assert by calls to dassert.
This routine is used to compare objects i -n unit tests.
2014-11-08 09:28:53 +01:00
Houtan Bastani c19950d358 update copyright dates for files already modified in 2012 2012-01-04 14:42:06 +01:00
Michel Juillard bd60a5beef made inverse_gamma_specification robust for a larger set of parameter values 2012-01-01 20:12:51 +01:00
Michel Juillard 6deaa23d95 changed critical value of secant for inverse_gamma_specification 2011-12-03 15:55:06 +01:00
Stéphane Adjemian (Charybdis) a0e1d3b34f Fixed bugs + cosmetic changes. 2011-12-02 12:14:38 +01:00
Sébastien Villemot 4a33af5a80 Added missing copyright header 2011-11-16 11:13:55 +01:00
Stéphane Adjemian (Charybdis) 30ed317d26 Cosmetic change in unitary test. 2011-11-14 12:08:21 +01:00
Stéphane Adjemian (Charybdis) 418382b364 Fixed bug (trac#225). Added texinfo header and unitary test. 2011-11-14 12:04:23 +01:00
Sébastien Villemot 02652f6eb8 Updated copyright notices 2011-02-04 17:27:33 +01:00
sebastien 1be52aaa5f Beautification: removed tabulation characters which were left in previous beautification pass
git-svn-id: https://www.dynare.org/svn/dynare/trunk@3300 ac1d8469-bf42-47a9-8791-bf33cf982152
2010-01-05 10:46:10 +00:00