Commit Graph

265 Commits (22f49971bce38f869b8380817ff5ce1cfceb6bda)

Author SHA1 Message Date
Johannes Pfeifer 4486d098b5 Save dsge_var objects at the mode 2016-06-15 00:30:28 +02:00
Johannes Pfeifer 2cf882fec5 Remove comments on dynare_estimation_1.m after implementing store_smoother_results 2016-06-15 00:30:28 +02:00
Johannes Pfeifer d08fd37986 Do not set oo_.posterior.optimization-fields when mh_posterior_mode_estimation is used 2016-06-15 00:30:28 +02:00
Johannes Pfeifer 552a9b5230 Fix bugs previously introduces in dynare_estimation_1.m related to penalty function 2016-06-15 00:30:28 +02:00
Johannes Pfeifer 2446ab02ba Transform persistent variables of newrat.m into function arguments 2016-06-15 00:30:28 +02:00
Johannes Pfeifer 329b91d717 Harmonize output of objective functions
Closes #1149
Mirrors 1ad8df4635
2016-06-15 00:30:28 +02:00
Houtan Bastani b454c28096 fix latex compilation on linux. #1207 2016-06-14 11:37:16 +02:00
Stéphane Adjemian (Charybdis) 67b808207c Added new algorithm for the estimation of nonlinear models. 2016-06-01 16:29:53 +02:00
Johannes Pfeifer 2baf88da47 Remove adaptive_metropolis_hastings 2016-05-19 23:16:29 +02:00
Johannes Pfeifer 86fcde0879 Cosmetic changes to dynare_estimation_1.m and store_smoother_results.m 2016-05-19 14:37:05 +02:00
Marco Ratto 7b3c42c6e1 provisions for reworked posterior sampling options:
- handle sub lists of individual samplers
- split checks in dynare_estimation_init.m and before running posterior_sampler.m [invhess checks]
- posterior sampler options checks moved from initial_estimation_checks.m to check_posterior_sampler_options.m
- added use_mh_covariance_matrix to imh and rwmh
- slice re-sets mode_compute=0 cova_compute=0
- updated test function
2016-05-19 14:37:05 +02:00
Marco Ratto 8bd963de64 Fill in posterior_mode with info from posterior samples. 2016-05-19 14:34:09 +02:00
Marco Ratto 46908d20c6 Provisions for new posterior sampler routines that factorize the individual iteration of individual samplers.
I contains a quick fix to adaptive_posterior_sampler.m, which cannot be embedded in the new structure.
2016-05-19 14:34:09 +02:00
Marco Ratto 951dfe8ff4 When mh_posterior_mode_estimation, trap cases where the prior mode is at the boundary. 2016-05-19 14:34:09 +02:00
Marco Ratto a3ab6de6c8 Added function to compute of inefficiency factors, used in McMCDiagnostics.m
Requires missing autocorr (available in some MATLAB toolboxes).
Requires factor out CutSample in dynare_estimation_1.m
2016-05-19 14:34:09 +02:00
Houtan Bastani 25121bca4f fix copyright dates 2016-05-04 16:05:31 +02:00
Johannes Pfeifer 6ad876cc18 Rename write_smoother_results to store_smoother_results.m to avoid confusion about its purpose 2016-04-12 11:37:12 +02:00
Johannes Pfeifer 6f8ca74490 Factorize saving of smoother results
Also takes care of prefilter and loglinear option for calib_smoother
Closes #803 and #804
2016-03-23 10:31:11 +01:00
Johannes Pfeifer fb20b464d4 Remove bayestopt_.mean_varobs and use dataset_info instead
Closes #255
2016-03-23 10:31:09 +01:00
Johannes Pfeifer dcf0d75d55 Add output of trend to DsgeSmoother.m and use it to reconstruct smoothed and filtered values 2016-03-23 10:19:41 +01:00
Johannes Pfeifer 1c816aef24 Various interrelated bugfixes dealing with detrending 2016-03-23 10:19:40 +01:00
Stéphane Adjemian (Charybdis) a1aa2bcd6e Changed second input of prior_bounds routine.
Do not pass options_ structure but only the required field (prior_trunc).
2015-12-11 18:50:54 +01:00
Stéphane Adjemian (Charybdis) 5fb1b1cc23 Added Weibull prior. 2015-12-04 14:50:44 +01:00
Michel Juillard c373d1e1be adding new option 'fast_kalman_filter' implementing Ed Herbst 2012 approach 2015-11-28 17:38:00 +01:00
Michel Juillard 105100c7fe remove global in dyn_forecast() and change input and output arguments 2015-11-28 17:38:00 +01:00
Johannes Pfeifer ca5c714e29 Replace global variables in CutSample.m and metropolis_draw.m by function arguments
Makes them usable outside of their current environment
2015-07-28 15:36:59 +02:00
Johannes Pfeifer 84e04522bf Account for options_.nk potentially being empty. 2015-07-21 10:41:47 +02:00
MichelJuillard 80253835a7 Merge pull request #738 from JohannesPfeifer/Kalman
Kalman
2015-07-20 15:02:40 +02:00
MichelJuillard f94910173d Merge pull request #937 from JohannesPfeifer/graph_fix
Various fixes related to graphs and eps-TeX-loaders
2015-07-20 14:36:20 +02:00
MichelJuillard c15e8f65c7 Merge pull request #769 from JohannesPfeifer/filtered_vars_ML
Do not create classical filtered variables at posterior mean if Bayesian...
2015-07-20 14:21:30 +02:00
Johannes Pfeifer b0bbab68f3 Add likelihood value to mode-file 2015-07-20 13:06:22 +02:00
Johannes Pfeifer bcc1008d3d Only create eps-loaders if eps-figures have been created (leaves table TeX-output unaffected) 2015-06-08 17:57:15 +02:00
Johannes Pfeifer be567c92a3 Fix description of generating function in eps-loader in dynare_estimation_1.m 2015-06-08 17:57:15 +02:00
Johannes Pfeifer 3c9b031bd1 Fix bug in dynare_estimation_init.m if steady state does not solve
There was no check in dynare_estimation_init.m whether the steady state solved, but the noconstant option was set nevertheless. This gave rise to cases where a steady state file returned 0 for the observables, but the steady state did not exits. Due to later using use_calibration, this problem with the initial values was not detected, but the observation equation featured no constant although it should. The solution is to move the use_calibration option before the first steady state computation and then issue an error if the parameterization does not work
2015-06-08 16:35:50 +02:00
Frédéric Karamé df67efcb7c add an exception for the use of gaussian filters and gradient-based estimation methods 2015-05-27 14:37:50 +02:00
Johannes Pfeifer 39ed3eb3f0 Fix bugs related to allowing mode_compute to be a string
Crashes otherwise
2015-04-06 11:24:42 +02:00
Marco Ratto c881cfff17 Fixed issues related to newratflag.
This options relates to alternative numerical hessian computations:

optim=('Hessian',1) is the default dynare numeric Hessian
optim=('Hessian',0) is the outer product gradient
optim=('Hessian',2) is the 'mixed' outer product gradient, where diagonal elements using second order derivation formula,

Both 0 and 2 cases require univariate filters, to ensure using maximum number of individual densities.
2015-03-12 17:24:21 +01:00
Johannes Pfeifer fe938c902a Fixed another bug related to options_.optim_opt being now initialized as an empty array
Finalizes  392486273e
2015-03-01 13:34:39 +01:00
Stéphane Adjemian (Charybdis) 0bb413e8fa Merge branch 'experimental-optimizers' 2015-02-24 20:44:39 +01:00
Stéphane Adjemian (Charybdis) 0ffb9dd6e2 Changed order of the input arguments in dynare_mimimize_objective.
It is more standard to have the name of the routine (defining the
objective to be minimized) as a first argument.
2015-02-23 14:35:41 +01:00
Stéphane Adjemian (Charybdis) 5865d46a74 Fixed bug. Wrong number of returned arguments when calling
dynare_minimize_objective (missing options_).
2015-02-21 18:14:15 +01:00
Houtan Bastani f72910ae33 fix preprocessor implimentation of filter_algorithm option to estimation. closes #843 2015-02-09 03:20:37 +01:00
Johannes Pfeifer dc7cfd3f0d Adjust smoother to data now being a column vector 2014-12-08 11:28:46 +01:00
Johannes Pfeifer dd6f8c182c Move call to optimizers in mode-computing to separate file to allow other function to access all integrated optimizers
- also moves several options to subfields of options structure
- allows setting options of newrat
- requires newrat to have compatible kalman_algo specified in order for it to not change options_
- explicitly disallows using analytical derivation with numerical gradient (before the numerical gradient request was overwritten)
- always outputs hessian returned by optimizer (empty matrix if not computed) and deletes subsequent overwriting if cova_compute=0
2014-12-04 19:36:12 +01:00
MichelJuillard 8e9cd95a89 Merge pull request #760 from JohannesPfeifer/fix_smoother
Fix bug when calling non-Bayesian smoother after Bayesian estimation
2014-11-20 10:27:15 +01:00
Johannes Pfeifer 86cac40362 Harmonize field length for FilteredVariables for calibrated smoother
Analogous to 4f5e0321228c0e4aca19fcd114f26dbaa1bbbfaf
2014-11-16 21:11:06 +01:00
Johannes Pfeifer 4b1e815728 Always display value of posterior/likelihood at the mode
Also clarifies that minus the posterior/likelihood is displayed
2014-11-16 21:11:06 +01:00
Johannes Pfeifer 1cbb17f929 Make sure classical filtered variables have the same length as the Bayesian ones, i.e. nobs. 2014-11-16 21:08:18 +01:00
Johannes Pfeifer 7c59edead2 Make simplex_optimization_routine.m usable outside of estimation
Removes hard-coded parameter names extracted from bayestopt_ by handing them over explicitly
2014-11-10 19:53:55 +01:00
Johannes Pfeifer 8443eb58cd Do not create classical filtered variables at posterior mean if Bayesian filtered variables were requested
The check for running the smoother on the model at the posterior mean is only based on whether the smoother option was set. But filtered_vars is a separate option. If not also checking whether Bayesian filtered variables have already been requested, oo_.FilteredVariables will contain both "ML" and Bayesian fields, which is confusing. The change only saves the filtered variables from the classical smoother if the user did not use Bayesian estimation.
2014-10-29 19:07:49 +01:00