Add function generate_trace_plots.m that plots trace plots for all estimated parameters
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@ -13712,6 +13712,13 @@ distribution. Results returned in @var{oo_.posterior_function_results}
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@end deffn
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@end deffn
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@anchor{generate_trace_plots}
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@deffn Command generate_trace_plots(@var{CHAIN_NUMBER}) ;
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Generates trace plots of the MCMC draws for all estimated parameters and the posterior density in the specified Markov Chain @code{CHAIN_NUMBER}.
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@end deffn
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@anchor{internals}
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@anchor{internals}
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@deffn {MATLAB/Octave command} internals @var{FLAG} @var{ROUTINENAME}[.m]|@var{MODFILENAME}
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@deffn {MATLAB/Octave command} internals @var{FLAG} @var{ROUTINENAME}[.m]|@var{MODFILENAME}
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@ -0,0 +1,63 @@
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function generate_trace_plots(chain_number)
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%function generate_trace_plots(chain_number)
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% Generates trace plots for all estimated parameters and the posterior
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%
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% INPUTS
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% chain_number: [scalar] number of the chain for which to construct the trace plots
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%
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% OUTPUTS
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% none
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%
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% SPECIAL REQUIREMENTS
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% none
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% Copyright (C) 2016 Dynare Team
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%
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% This file is part of Dynare.
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%
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% Dynare is free software: you can redistribute it and/or modify
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% it under the terms of the GNU General Public License as published by
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% the Free Software Foundation, either version 3 of the License, or
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% (at your option) any later version.
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%
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% Dynare is distributed in the hope that it will be useful,
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% but WITHOUT ANY WARRANTY; without even the implied warranty of
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% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
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% GNU General Public License for more details.
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%
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% You should have received a copy of the GNU General Public License
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% along with Dynare. If not, see <http://www.gnu.org/licenses/>.
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global M_ options_ estim_params_
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% Get informations about the posterior draws:
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MetropolisFolder = CheckPath('metropolis',M_.dname);
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load_last_mh_history_file(MetropolisFolder, M_.fname);
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if chain_number>record.Nblck
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error('generate_trace_plots:: chain number is bigger than existing number of chains')
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end
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trace_plot(options_,M_,estim_params_,'PosteriorDensity',chain_number)
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for ii=1:size(estim_params_.param_vals,1)
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parameter_name=deblank(M_.param_names(estim_params_.param_vals(ii,1),:));
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trace_plot(options_,M_,estim_params_,'DeepParameter',chain_number,parameter_name)
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end
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for ii=1:size(estim_params_.var_exo,1)
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parameter_name=deblank(M_.exo_names(estim_params_.var_exo(ii,1),:));
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trace_plot(options_,M_,estim_params_,'StructuralShock',chain_number,parameter_name)
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end
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for ii=1:size(estim_params_.corrn,1)
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parameter_name_1=deblank(M_.endo_names(estim_params_.corrn(ii,1),:));
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parameter_name_2=deblank(M_.endo_names(estim_params_.corrn(ii,2),:));
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trace_plot(options_,M_,estim_params_,'MeasurementError',chain_number,parameter_name_1,parameter_name_2)
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end
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for ii=1:size(estim_params_.corrx,1)
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parameter_name_1=deblank(M_.exo_names(estim_params_.corrx(ii,1),:));
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parameter_name_2=deblank(M_.exo_names(estim_params_.corrx(ii,2),:));
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trace_plot(options_,M_,estim_params_,'StructuralShock',chain_number,parameter_name_1,parameter_name_2)
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end
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