Make naming in GetPosteriorMeanVariance.m more expressive
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@ -1,6 +1,6 @@
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function [mean,variance] = GetPosteriorMeanVariance(M,drop)
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function [mean,variance] = GetPosteriorMeanVariance(M,drop)
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% Copyright (C) 2012, 2013 Dynare Team
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% Copyright (C) 2012-2016 Dynare Team
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%
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%
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% This file is part of Dynare.
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% This file is part of Dynare.
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%
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%
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@ -26,29 +26,28 @@ function [mean,variance] = GetPosteriorMeanVariance(M,drop)
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NbrBlocks = record.Nblck;
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NbrBlocks = record.Nblck;
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mean = 0;
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mean = 0;
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variance = 0;
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variance = 0;
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z = [];
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nkept = 0;
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NbrKeptDraws = 0;
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for i=1:NbrBlocks
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for i=1:NbrBlocks
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n = 0;
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NbrDrawsCurrentBlock = 0;
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for j=1:NbrFiles
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for j=1:NbrFiles
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o = load([BaseName '_mh' int2str(j) '_blck' int2str(i)]);
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o = load([BaseName '_mh' int2str(j) '_blck' int2str(i),'.mat']);
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m = size(o.x2,1);
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NbrDrawsCurrentFile = size(o.x2,1);
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if n + m <= drop*NbrDraws
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if NbrDrawsCurrentBlock + NbrDrawsCurrentFile <= drop*NbrDraws
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n = n + m;
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NbrDrawsCurrentBlock = NbrDrawsCurrentBlock + NbrDrawsCurrentFile;
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continue
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continue
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elseif n < drop*NbrDraws
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elseif NbrDrawsCurrentBlock < drop*NbrDraws
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k = ceil(drop*NbrDraws - n + 1);
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FirstDraw = ceil(drop*NbrDraws - NbrDrawsCurrentBlock + 1);
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x2 = o.x2(k:end,:);
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x2 = o.x2(FirstDraw:end,:);
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else
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else
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x2 = o.x2;
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x2 = o.x2;
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end
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end
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z =[z; x2];
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NbrKeptDrawsCurrentFile = size(x2,1);
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p = size(x2,1);
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%recursively compute mean and variance
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mean = (nkept*mean + sum(x2)')/(nkept+p);
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mean = (NbrKeptDraws*mean + sum(x2)')/(NbrKeptDraws+NbrKeptDrawsCurrentFile);
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x = bsxfun(@minus,x2,mean');
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x2Demeaned = bsxfun(@minus,x2,mean');
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variance = (nkept*variance + x'*x)/(nkept+p);
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variance = (NbrKeptDraws*variance + x2Demeaned'*x2Demeaned)/(NbrKeptDraws+NbrKeptDrawsCurrentFile);
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n = n + m;
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NbrDrawsCurrentBlock = NbrDrawsCurrentBlock + NbrDrawsCurrentFile;
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nkept = nkept + p;
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NbrKeptDraws = NbrKeptDraws + NbrKeptDrawsCurrentFile;
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end
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end
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end
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end
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