diff --git a/src/DSMH_initialization.m b/src/DSMH_initialization.m
new file mode 100644
index 000000000..38e16da4e
--- /dev/null
+++ b/src/DSMH_initialization.m
@@ -0,0 +1,118 @@
+function [ ix2, temperedlogpost, loglik, ModelName, MetropolisFolder, npar, NumberOfParticles, bayestopt_] = ...
+ DSMH_initialization(TargetFun, xparam1, mh_bounds,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,oo_)
+% function [ ix2, ilogpo2, ModelName, MetropolisFolder, FirstBlock, FirstLine, npar, NumberOfParticles, bayestopt_] = ...
+% DSMH_initialization(TargetFun, xparam1, mh_bounds,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,oo_)
+% Dynamic Striated Metropolis-Hastings initialization.
+%
+% INPUTS
+% o TargetFun [char] string specifying the name of the objective
+% function (tempered posterior kernel and likelihood).
+% o xparam1 [double] (p*1) vector of parameters to be estimated (initial values).
+% o mh_bounds [double] (p*2) matrix defining lower and upper bounds for the parameters.
+% o dataset_ data structure
+% o dataset_info dataset info structure
+% o options_ options structure
+% o M_ model structure
+% o estim_params_ estimated parameters structure
+% o bayestopt_ estimation options structure
+% o oo_ outputs structure
+%
+% OUTPUTS
+% o ix2 [double] (NumberOfParticles*npar) vector of starting points for different chains
+% o ilogpo2 [double] (NumberOfParticles*1) vector of initial posterior values for different chains
+% o iloglik2 [double] (NumberOfParticles*1) vector of initial likelihood values for different chains
+% o ModelName [string] name of the mod-file
+% o MetropolisFolder [string] path to the Metropolis subfolder
+% o npar [scalar] number of parameters estimated
+% o NumberOfParticles [scalar] Number of particles requested for the parameters distributions
+% o bayestopt_ [structure] estimation options structure
+%
+% SPECIAL REQUIREMENTS
+% None.
+
+% Copyright (C) 2006-2017 Dynare Team
+%
+% This file is part of Dynare.
+%
+% Dynare is free software: you can redistribute it and/or modify
+% it under the terms of the GNU General Public License as published by
+% the Free Software Foundation, either version 3 of the License, or
+% (at your option) any later version.
+%
+% Dynare is distributed in the hope that it will be useful,
+% but WITHOUT ANY WARRANTY; without even the implied warranty of
+% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+% GNU General Public License for more details.
+%
+% You should have received a copy of the GNU General Public License
+% along with Dynare. If not, see .
+
+%Initialize outputs
+ix2 = [];
+ilogpo2 = [];
+iloglik2 = [];
+ModelName = [];
+MetropolisFolder = [];
+npar = [];
+NumberOfParticles = [];
+
+ModelName = M_.fname;
+if ~isempty(M_.bvar)
+ ModelName = [ModelName '_bvar'];
+end
+
+MetropolisFolder = CheckPath('dsmh',M_.dname);
+BaseName = [MetropolisFolder filesep ModelName];
+
+NumberOfParticles = options_.dsmh.number_of_particles; %Number of particles for the parameters
+npar = length(xparam1);
+
+% Here we start a new DS Metropolis-Hastings, previous draws are discarded.
+disp('Estimation::dsmh: Initialization...')
+% Delete old dsmh files if any...
+files = dir([BaseName '_dsmh*_blck*.mat']);
+%if length(files)
+% delete([BaseName '_dsmh*_blck*.mat']);
+% disp('Estimation::smc: Old dsmh-files successfully erased!')
+%end
+% Delete old log file.
+file = dir([ MetropolisFolder '/dsmh.log']);
+%if length(file)
+% delete([ MetropolisFolder '/dsmh.log']);
+% disp('Estimation::dsmh: Old dsmh.log file successfully erased!')
+% disp('Estimation::dsmh: Creation of a new dsmh.log file.')
+%end
+fidlog = fopen([MetropolisFolder '/dsmh.log'],'w');
+fprintf(fidlog,'%% DSMH log file (Dynare).\n');
+fprintf(fidlog,['%% ' datestr(now,0) '.\n']);
+fprintf(fidlog,' \n\n');
+fprintf(fidlog,'%% Session 1.\n');
+fprintf(fidlog,' \n');
+prior_draw(bayestopt_,options_.prior_trunc);
+% Find initial values for the NumberOfParticles chains...
+set_dynare_seed('default');
+fprintf(fidlog,[' Initial values of the parameters:\n']);
+disp('Estimation::dsmh: Searching for initial values...');
+ix2 = zeros(npar,NumberOfParticles);
+temperedlogpost = zeros(NumberOfParticles,1);
+loglik = zeros(NumberOfParticles,1);
+%stderr = sqrt(bsxfun(@power,mh_bounds.ub-mh_bounds.lb,2)/12)/10;
+for j=1:NumberOfParticles
+ validate = 0;
+ while validate == 0
+ candidate = prior_draw()';
+% candidate = xparam1(:) + 0.001*randn(npar,1);%bsxfun(@times,stderr,randn(npar,1)) ;
+ if all(candidate(:) >= mh_bounds.lb) && all(candidate(:) <= mh_bounds.ub)
+ ix2(:,j) = candidate ;
+ [temperedlogpost(j),loglik(j)] = tempered_likelihood(TargetFun,candidate,0.0,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_);
+ if isfinite(loglik(j)) % if returned log-density is Inf or Nan (penalized value)
+ validate = 1;
+ end
+ end
+ end
+end
+fprintf(fidlog,' \n');
+disp('Estimation::dsmh: Initial values found!')
+skipline()
+
+
diff --git a/src/DSMH_sampler.m b/src/DSMH_sampler.m
new file mode 100644
index 000000000..56c9185a0
--- /dev/null
+++ b/src/DSMH_sampler.m
@@ -0,0 +1,303 @@
+function DSMH_sampler(TargetFun,xparam1,mh_bounds,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,oo_)
+% function DSMH_sampler(TargetFun,ProposalFun,xparam1,sampler_options,mh_bounds,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,oo_)
+% Dynamic Striated Metropolis-Hastings algorithm.
+%
+% INPUTS
+% o TargetFun [char] string specifying the name of the objective
+% function (posterior kernel).
+% o ProposalFun [char] string specifying the name of the proposal
+% density
+% o xparam1 [double] (p*1) vector of parameters to be estimated (initial values).
+% o sampler_options structure
+% .invhess [double] (p*p) matrix, posterior covariance matrix (at the mode).
+% o mh_bounds [double] (p*2) matrix defining lower and upper bounds for the parameters.
+% o dataset_ data structure
+% o dataset_info dataset info structure
+% o options_ options structure
+% o M_ model structure
+% o estim_params_ estimated parameters structure
+% o bayestopt_ estimation options structure
+% o oo_ outputs structure
+%
+% SPECIAL REQUIREMENTS
+% None.
+%
+% PARALLEL CONTEXT
+% The most computationally intensive part of this function may be executed
+% in parallel. The code suitable to be executed in
+% parallel on multi core or cluster machine (in general a 'for' cycle)
+% has been removed from this function and been placed in the posterior_sampler_core.m funtion.
+%
+% The DYNARE parallel packages comprise a i) set of pairs of Matlab functions that can be executed in
+% parallel and called name_function.m and name_function_core.m and ii) a second set of functions used
+% to manage the parallel computations.
+%
+% This function was the first function to be parallelized. Later, other
+% functions have been parallelized using the same methodology.
+% Then the comments write here can be used for all the other pairs of
+% parallel functions and also for management functions.
+
+% Copyright (C) 2006-2017 Dynare Team
+%
+% This file is part of Dynare.
+%
+% Dynare is free software: you can redistribute it and/or modify
+% it under the terms of the GNU General Public License as published by
+% the Free Software Foundation, either version 3 of the License, or
+% (at your option) any later version.
+%
+% Dynare is distributed in the hope that it will be useful,
+% but WITHOUT ANY WARRANTY; without even the implied warranty of
+% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+% GNU General Public License for more details.
+%
+% You should have received a copy of the GNU General Public License
+% along with Dynare. If not, see .
+
+
+lambda = exp(bsxfun(@minus,options_.dsmh.H,1:1:options_.dsmh.H)/(options_.dsmh.H-1)*log(options_.dsmh.lambda1));
+c = 55 ;
+
+% Step 0: Initialization of the sampler
+[ param, tlogpost_iminus1, loglik, ~, ~, npar, nparticles, bayestopt_] = ...
+ DSMH_initialization(TargetFun, xparam1, mh_bounds, dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,oo_);
+
+ESS = zeros(options_.dsmh.H,1) ;
+zhat = 1 ;
+
+% The DSMH starts here
+ for i=1:options_.dsmh.H
+ disp('');
+ disp('Tempered iteration');
+ disp(i) ;
+ % Step 1: sort the densities and compute IS weigths
+ [tlogpost_iminus1,loglik,param] = sort_matrices(tlogpost_iminus1,loglik,param) ;
+ [tlogpost_i,weights,zhat,ESS,mu,Omegachol] = compute_IS_weights_and_moments(param,tlogpost_iminus1,loglik,lambda,i,zhat,ESS) ;
+ % Step 2: tune c_i
+ c = tune_c(TargetFun,param,tlogpost_i,lambda,i,c,Omegachol,weights,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_);
+ % Step 3: Metropolis step
+ [param,tlogpost_iminus1,loglik] = mutation_DSMH(TargetFun,param,tlogpost_i,tlogpost_iminus1,loglik,lambda,i,c,Omegachol,weights,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_);
+ end
+
+weights = exp(loglik*(lambda(end)-lambda(end-1)));
+weights = weights/sum(weights);
+indx_resmpl = DSMH_resampling(weights,rand(1,1),nparticles);
+distrib_param = param(:,indx_resmpl);
+
+%% Plot parameters densities
+TeX = options_.TeX;
+
+[nbplt,nr,nc,lr,lc,nstar] = pltorg(npar);
+
+if TeX
+ fidTeX = fopen([M_.fname '_param_density.tex'],'w');
+ fprintf(fidTeX,'%% TeX eps-loader file generated by DSMH.m (Dynare).\n');
+ fprintf(fidTeX,['%% ' datestr(now,0) '\n']);
+ fprintf(fidTeX,' \n');
+end
+
+number_of_grid_points = 2^9; % 2^9 = 512 !... Must be a power of two.
+bandwidth = 0; % Rule of thumb optimal bandwidth parameter.
+kernel_function = 'gaussian'; % Gaussian kernel for Fast Fourier Transform approximation.
+for plt = 1:nbplt,
+ if TeX
+ NAMES = [];
+ TeXNAMES = [];
+ end
+ hh = dyn_figure(options_.nodisplay,'Name','Parameters Densities');
+ for k=1:min(nstar,npar-(plt-1)*nstar)
+ subplot(nr,nc,k)
+ kk = (plt-1)*nstar+k;
+ [name,texname] = get_the_name(kk,TeX,M_,estim_params_,options_);
+ if TeX
+ if isempty(NAMES)
+ NAMES = name;
+ TeXNAMES = texname;
+ else
+ NAMES = char(NAMES,name);
+ TeXNAMES = char(TeXNAMES,texname);
+ end
+ end
+ optimal_bandwidth = mh_optimal_bandwidth(distrib_param(kk,:)',nparticles,bandwidth,kernel_function);
+ [density(:,1),density(:,2)] = kernel_density_estimate(distrib_param(kk,:)',number_of_grid_points,...
+ nparticles,optimal_bandwidth,kernel_function);
+ plot(density(:,1),density(:,2));
+ hold on
+ title(name,'interpreter','none')
+ hold off
+ axis tight
+ drawnow
+ end
+ dyn_saveas(hh,[ M_.fname '_param_density' int2str(plt) ],options_.nodisplay,options_.graph_format);
+ if TeX
+ % TeX eps loader file
+ fprintf(fidTeX,'\\begin{figure}[H]\n');
+ for jj = 1:min(nstar,length(x)-(plt-1)*nstar)
+ fprintf(fidTeX,'\\psfrag{%s}[1][][0.5][0]{%s}\n',deblank(NAMES(jj,:)),deblank(TeXNAMES(jj,:)));
+ end
+ fprintf(fidTeX,'\\centering \n');
+ fprintf(fidTeX,'\\includegraphics[scale=0.5]{%s_ParametersDensities%s}\n',M_.fname,int2str(plt));
+ fprintf(fidTeX,'\\caption{ParametersDensities.}');
+ fprintf(fidTeX,'\\label{Fig:ParametersDensities:%s}\n',int2str(plt));
+ fprintf(fidTeX,'\\end{figure}\n');
+ fprintf(fidTeX,' \n');
+ end
+end
+
+function indx = DSMH_resampling(weights,noise,number)
+ indx = zeros(number,1);
+ cumweights = cumsum(weights);
+ randvec = (transpose(1:number)-1+noise(:))/number;
+ j = 1;
+ for i=1:number
+ while (randvec(i)>cumweights(j))
+ j = j+1;
+ end
+ indx(i) = j;
+ end
+
+function [tlogpost_iminus1,loglik,param] = sort_matrices(tlogpost_iminus1,loglik,param)
+ [~,indx_ord] = sortrows(tlogpost_iminus1);
+ tlogpost_iminus1 = tlogpost_iminus1(indx_ord);
+ param = param(:,indx_ord);
+ loglik = loglik(indx_ord);
+
+function [tlogpost_i,weights,zhat,ESS,mu,Omegachol] = compute_IS_weights_and_moments(param,tlogpost_iminus1,loglik,lambda,i,zhat,ESS)
+ if i==1
+ tlogpost_i = tlogpost_iminus1 + loglik*lambda(i);
+ else
+ tlogpost_i = tlogpost_iminus1 + loglik*(lambda(i)-lambda(i-1));
+ end
+ weights = exp(tlogpost_i-tlogpost_iminus1);
+ zhat = (mean(weights))*zhat ;
+ weights = weights/sum(weights);
+ ESS(i) = 1/sum(weights.^2);
+ % estimates of mean and variance
+ mu = param*weights;
+ z = bsxfun(@minus,param,mu);
+ Omega = z*diag(weights)*z';
+ Omegachol = chol(Omega)';
+
+function c = tune_c(TargetFun,param,tlogpost_i,lambda,i,c,Omegachol,weights,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_)
+ disp('tuning c_i...');
+ disp('Initial value =');
+ disp(c) ;
+ npar = size(param,1);
+ lower_prob = (.5*(options_.dsmh.alpha0+options_.dsmh.alpha1))^5;
+ upper_prob = (.5*(options_.dsmh.alpha0+options_.dsmh.alpha1))^(1/5);
+ stop=0 ;
+ while stop==0
+ acpt = 0.0;
+ indx_resmpl = DSMH_resampling(weights,rand(1,1),options_.dsmh.G);
+ param0 = param(:,indx_resmpl);
+ tlogpost0 = tlogpost_i(indx_resmpl);
+ for j=1:options_.dsmh.G
+ for l=1:options_.dsmh.K
+ validate = 0;
+ while validate == 0
+ candidate = param0(:,j) + sqrt(c)*Omegachol*randn(npar,1);
+ if all(candidate >= mh_bounds.lb) && all(candidate <= mh_bounds.ub)
+ [tlogpostx,loglikx] = tempered_likelihood(TargetFun,candidate,lambda(i),dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_);
+ if isfinite(loglikx) % if returned log-density is not Inf or Nan (penalized value)
+ validate = 1;
+ if rand(1,1)= mh_bounds.lb) && all(candidate(:) <= mh_bounds.ub)
+ [tlogpostx,loglikx] = tempered_likelihood(TargetFun,candidate,lambda(i),dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,mh_bounds,oo_);
+ if isfinite(loglikx) % if returned log-density is not Inf or Nan (penalized value)
+ validate = 1;
+ if u2