Remove global variables from prior_posterior_statistics.m and PosteriorIRF.m
parent
782a2e8d69
commit
5231fc04c1
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@ -1,10 +1,18 @@
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function PosteriorIRF(type,dispString)
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function oo_=PosteriorIRF(type,options_,estim_params_,oo_,M_,bayestopt_,dataset_,dataset_info,dispString)
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% PosteriorIRF(type,options_,estim_params_,oo_,M_,bayestopt_,dataset_,dataset_info,dispString)
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% Builds posterior IRFs after the MH algorithm.
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%
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% INPUTS
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% o type [char] string specifying the joint density of the
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% deep parameters ('prior','posterior').
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% o dispString [char] string to display in the console.
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% o type [char] string specifying the joint density of the
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% deep parameters ('prior','posterior').
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% o options_ [structure] storing the options
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% o estim_params_ [structure] storing information about estimated parameters
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% o oo_ [structure] storing the results
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% o M_ [structure] storing the model information
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% o bayestopt_ [structure] storing information about priors
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% o dataset_ [structure] storing the dataset
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% o dataset_info [structure] Various information about the dataset
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% o dispString [char] string to display in the console.
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%
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% OUTPUTS
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% None (oo_ and plots).
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@ -34,9 +42,6 @@ function PosteriorIRF(type,dispString)
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% You should have received a copy of the GNU General Public License
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% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
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global options_ estim_params_ oo_ M_ bayestopt_ dataset_ dataset_info
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% Set the number of periods
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if isempty(options_.irf) || ~options_.irf
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options_.irf = 40;
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@ -62,13 +67,7 @@ end
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irf_shocks_indx = getIrfShocksIndx(M_, options_);
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% Set various parameters & Check or create directories
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nvx = estim_params_.nvx;
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nvn = estim_params_.nvn;
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ncx = estim_params_.ncx;
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ncn = estim_params_.ncn;
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np = estim_params_.np ;
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npar = nvx+nvn+ncx+ncn+np;
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offset = npar-np; clear('nvx','nvn','ncx','ncn','np');
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npar = estim_params_.nvx+estim_params_.nvn+estim_params_.ncx+estim_params_.ncn+estim_params_.np ;
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nvobs = dataset_.vobs;
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gend = dataset_.nobs;
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@ -118,7 +117,8 @@ elseif strcmpi(type,'gsa')
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end
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x=[lpmat0(istable,:) lpmat(istable,:)];
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clear lpmat istable
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B=size(x,1); options_.B = B;
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B=size(x,1);
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options_.B = B;
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else% type = 'prior'
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B = options_.prior_draws;
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options_.B = B;
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@ -130,23 +130,7 @@ irun2 = 0;
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NumberOfIRFfiles_dsge = 1;
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NumberOfIRFfiles_dsgevar = 1;
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ifil2 = 1;
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% Create arrays
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if B <= MAX_nruns
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stock_param = zeros(B, npar);
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else
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stock_param = zeros(MAX_nruns, npar);
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end
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if B >= MAX_nirfs_dsge
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stock_irf_dsge = zeros(options_.irf,nvar,M_.exo_nbr,MAX_nirfs_dsge);
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else
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stock_irf_dsge = zeros(options_.irf,nvar,M_.exo_nbr,B);
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end
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if MAX_nirfs_dsgevar
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if B >= MAX_nirfs_dsgevar
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stock_irf_bvardsge = zeros(options_.irf,nvobs,M_.exo_nbr,MAX_nirfs_dsgevar);
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else
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stock_irf_bvardsge = zeros(options_.irf,nvobs,M_.exo_nbr,B);
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end
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NumberOfLags = options_.dsge_varlag;
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NumberOfLagsTimesNvobs = NumberOfLags*nvobs;
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if options_.noconstant
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@ -154,10 +138,9 @@ if MAX_nirfs_dsgevar
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else
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NumberOfParametersPerEquation = NumberOfLagsTimesNvobs+1;
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end
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Companion_matrix = diag(ones(nvobs*(NumberOfLags-1),1),-nvobs);
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end
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% First block of code executed in parallel. The function devoted to do it is PosteriorIRF_core1.m
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% First block of code executed in parallel. The function devoted to do it is PosteriorIRF_core1.m
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% function.
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b = 0;
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@ -183,7 +166,6 @@ if ~strcmpi(type,'prior')
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localVars.x=x;
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end
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b=0;
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if options_.dsge_var
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localVars.gend = gend;
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localVars.nvobs = nvobs;
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@ -202,6 +184,16 @@ localVars.NumberOfIRFfiles_dsgevar=NumberOfIRFfiles_dsgevar;
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localVars.ifil2=ifil2;
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localVars.MhDirectoryName=MhDirectoryName;
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%store main structures
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localVars.options_=options_;
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localVars.estim_params_= estim_params_;
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localVars.M_= M_;
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localVars.oo_= oo_;
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localVars.bayestopt_= bayestopt_;
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localVars.dataset_= dataset_;
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localVars.dataset_info= dataset_info;
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% Like sequential execution!
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if isnumeric(options_.parallel)
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[fout] = PosteriorIRF_core1(localVars,1,B,0);
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@ -225,14 +217,6 @@ else
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localVars.NumberOfIRFfiles_dsgevar=NumberOfIRFfiles_dsgevar;
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localVars.ifil2=ifil2;
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globalVars = struct('M_',M_, ...
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'options_', options_, ...
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'bayestopt_', bayestopt_, ...
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'estim_params_', estim_params_, ...
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'oo_', oo_, ...
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'dataset_',dataset_, ...
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'dataset_info',dataset_info);
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% which files have to be copied to run remotely
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NamFileInput(1,:) = {'',[M_.fname '.static.m']};
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NamFileInput(2,:) = {'',[M_.fname '.dynamic.m']};
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@ -246,7 +230,7 @@ else
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NamFileInput(length(NamFileInput)+1,:)={'',[M_.fname '.steadystate.m']};
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end
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end
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[fout] = masterParallel(options_.parallel, 1, B,NamFileInput,'PosteriorIRF_core1', localVars, globalVars, options_.parallel_info);
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[fout] = masterParallel(options_.parallel, 1, B,NamFileInput,'PosteriorIRF_core1', localVars, [], options_.parallel_info);
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nosaddle=0;
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for j=1:length(fout)
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nosaddle = nosaddle + fout(j).nosaddle;
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@ -260,9 +244,9 @@ if nosaddle
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disp(['PosteriorIRF :: Percentage of discarded posterior draws = ' num2str(nosaddle/(B+nosaddle))])
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end
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ReshapeMatFiles('irf_dsge',type)
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ReshapeMatFiles(M_.fname,M_.dname,M_.exo_nbr,M_.endo_nbr,options_,'irf_dsge',type)
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if MAX_nirfs_dsgevar
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ReshapeMatFiles('irf_bvardsge')
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ReshapeMatFiles(M_.fname,M_.dname,M_.exo_nbr,M_.endo_nbr,options_,'irf_bvardsge')
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end
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if strcmpi(type,'gsa')
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@ -293,21 +277,21 @@ tit = M_.exo_names;
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kdx = 0;
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for file = 1:NumberOfIRFfiles_dsge
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load([MhDirectoryName filesep M_.fname '_IRF_DSGEs' int2str(file) '.mat']);
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temp=load([MhDirectoryName filesep M_.fname '_IRF_DSGEs' int2str(file) '.mat']);
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for i = irf_shocks_indx
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for j = 1:nvar
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for k = 1:size(STOCK_IRF_DSGE,1)
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for k = 1:size(temp.STOCK_IRF_DSGE,1)
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kk = k+kdx;
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[MeanIRF(kk,j,i),MedianIRF(kk,j,i),VarIRF(kk,j,i),HPDIRF(kk,:,j,i),...
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DistribIRF(kk,:,j,i)] = posterior_moments(squeeze(STOCK_IRF_DSGE(k,j,i,:)),0,options_.mh_conf_sig);
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DistribIRF(kk,:,j,i)] = posterior_moments(squeeze(temp.STOCK_IRF_DSGE(k,j,i,:)),0,options_.mh_conf_sig);
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end
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end
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end
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kdx = kdx + size(STOCK_IRF_DSGE,1);
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kdx = kdx + size(temp.STOCK_IRF_DSGE,1);
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end
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clear STOCK_IRF_DSGE;
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clear temp;
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for i = irf_shocks_indx
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for j = 1:nvar
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@ -332,20 +316,20 @@ if MAX_nirfs_dsgevar
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tit = M_.exo_names;
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kdx = 0;
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for file = 1:NumberOfIRFfiles_dsgevar
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load([MhDirectoryName filesep M_.fname '_IRF_BVARDSGEs' int2str(file) '.mat']);
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temp=load([MhDirectoryName filesep M_.fname '_IRF_BVARDSGEs' int2str(file) '.mat']);
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for i = irf_shocks_indx
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for j = 1:nvar
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for k = 1:size(STOCK_IRF_BVARDSGE,1)
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for k = 1:size(temp.STOCK_IRF_BVARDSGE,1)
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kk = k+kdx;
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[MeanIRFdsgevar(kk,j,i),MedianIRFdsgevar(kk,j,i),VarIRFdsgevar(kk,j,i),...
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HPDIRFdsgevar(kk,:,j,i),DistribIRFdsgevar(kk,:,j,i)] = ...
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posterior_moments(squeeze(STOCK_IRF_BVARDSGE(k,j,i,:)),0,options_.mh_conf_sig);
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posterior_moments(squeeze(temp.STOCK_IRF_BVARDSGE(k,j,i,:)),0,options_.mh_conf_sig);
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end
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end
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end
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kdx = kdx + size(STOCK_IRF_BVARDSGE,1);
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kdx = kdx + size(temp.STOCK_IRF_BVARDSGE,1);
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end
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clear STOCK_IRF_BVARDSGE;
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clear temp;
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for i = irf_shocks_indx
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for j = 1:nvar
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name = sprintf('%s_%s', M_.endo_names{IndxVariables(j)}, tit{i});
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@ -358,25 +342,24 @@ if MAX_nirfs_dsgevar
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end
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end
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end
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%
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% Finally I build the plots.
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%
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%% Finally I build the plots.
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% Second block of code executed in parallel, with the exception of file
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% .tex generation always run in sequentially. This portion of code is execute in parallel by
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% .tex generation always run in sequentially. This portion of code is executed in parallel by
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% PosteriorIRF_core2.m function.
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if ~options_.nograph && ~options_.no_graph.posterior
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% Save the local variables.
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localVars=[];
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localVars.dname=M_.dname;
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localVars.fname=M_.fname;
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localVars.options_=options_;
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Check=options_.TeX;
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if (Check)
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localVars.varlist_TeX=varlist_TeX;
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end
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localVars.nvar=nvar;
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localVars.MeanIRF=MeanIRF;
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localVars.tit=tit;
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@ -445,9 +428,7 @@ if ~options_.nograph && ~options_.no_graph.posterior
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if isRemoteOctave
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[fout] = PosteriorIRF_core2(localVars,1,M_.exo_nbr,0);
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else
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globalVars = struct('M_',M_, ...
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'options_', options_);
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globalVars = [];
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[fout] = masterParallel(options_.parallel, 1, M_.exo_nbr,NamFileInput,'PosteriorIRF_core2', localVars, globalVars, options_.parallel_info);
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end
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end
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@ -455,7 +436,6 @@ if ~options_.nograph && ~options_.no_graph.posterior
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[fout] = PosteriorIRF_core2(localVars,1,M_.exo_nbr,0);
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end
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% END parallel code!
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end
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fprintf('%s: Posterior IRFs, done!\n',dispString);
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fprintf('%s: Posterior IRFs, done!\n',dispString);
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@ -1,4 +1,5 @@
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function myoutput=PosteriorIRF_core1(myinputs,fpar,B,whoiam, ThisMatlab)
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%myoutput=PosteriorIRF_core1(myinputs,fpar,B,whoiam, ThisMatlab)
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% Generates and stores Posterior IRFs
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% PARALLEL CONTEXT
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% This function perfoms in parallel execution a portion of the PosteriorIRF.m code.
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@ -40,9 +41,6 @@ function myoutput=PosteriorIRF_core1(myinputs,fpar,B,whoiam, ThisMatlab)
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% You should have received a copy of the GNU General Public License
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% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
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global options_ estim_params_ oo_ M_ bayestopt_ dataset_ dataset_info
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if nargin<4
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whoiam=0;
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end
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@ -50,6 +48,14 @@ end
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% Reshape 'myinputs' for local computation.
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% In order to avoid confusion in the name space, the instruction struct2local(myinputs) is replaced by:
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options_= myinputs.options_;
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estim_params_= myinputs.estim_params_;
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M_= myinputs.M_;
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oo_= myinputs.oo_;
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bayestopt_= myinputs.bayestopt_;
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dataset_= myinputs.dataset_;
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dataset_info= myinputs.dataset_info;
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IRUN = myinputs.IRUN;
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irun =myinputs.irun;
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irun2=myinputs.irun2;
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@ -78,13 +84,10 @@ if options_.dsge_var
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bounds = prior_bounds(bayestopt_,options_.prior_trunc);
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end
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if whoiam
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Parallel=myinputs.Parallel;
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end
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% MhDirectoryName = myinputs.MhDirectoryName;
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if strcmpi(type,'posterior')
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MhDirectoryName = CheckPath('metropolis',M_.dname);
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elseif strcmpi(type,'gsa')
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@ -115,12 +118,10 @@ else
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h = dyn_waitbar(prct0,'Bayesian (prior) IRFs...');
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end
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OutputFileName_bvardsge = {};
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OutputFileName_dsge = {};
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OutputFileName_param = {};
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fpar = fpar-1;
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fpar0=fpar;
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nosaddle=0;
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@ -1,5 +1,5 @@
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function myoutput=PosteriorIRF_core2(myinputs,fpar,npar,whoiam,ThisMatlab)
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% function myoutput=PosteriorIRF_core2(myinputs,fpar,npar,whoiam, ThisMatlab)
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% myoutput=PosteriorIRF_core2(myinputs,fpar,npar,whoiam, ThisMatlab)
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% Generates the Posterior IRFs plot from the IRFs generated in
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% PosteriorIRF_core1
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%
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@ -47,8 +47,6 @@ function myoutput=PosteriorIRF_core2(myinputs,fpar,npar,whoiam,ThisMatlab)
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% You should have received a copy of the GNU General Public License
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% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
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global options_ M_
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if nargin<4
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whoiam=0;
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end
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@ -56,6 +54,7 @@ end
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% Reshape 'myinputs' for local computation.
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% In order to avoid confusion in the name space, the instruction struct2local(myinputs) is replaced by:
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options_=myinputs.options_;
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Check=options_.TeX;
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if (Check)
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varlist_TeX=myinputs.varlist_TeX;
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@ -67,6 +66,9 @@ tit=myinputs.tit;
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nn=myinputs.nn;
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MAX_nirfs_dsgevar=myinputs.MAX_nirfs_dsgevar;
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HPDIRF=myinputs.HPDIRF;
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dname=myinputs.dname;
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fname=myinputs.fname;
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if options_.dsge_var
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HPDIRFdsgevar=myinputs.HPDIRFdsgevar;
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MeanIRFdsgevar=myinputs.MeanIRFdsgevar;
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@ -82,7 +84,7 @@ end
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% To save the figures where the function is computed!
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DirectoryName = CheckPath('Output',M_.dname);
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DirectoryName = CheckPath('Output',dname);
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RemoteFlag = 0;
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if whoiam
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@ -117,7 +119,6 @@ for i=fpar:npar
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h2 = area(1:options_.irf,HPDIRF(:,1,j,i),'FaceColor',[1 1 1],'BaseValue',min(HPDIRF(:,1,j,i))); %white below HPDIinf and minimum of HPDIinf
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end
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plot(1:options_.irf,MeanIRF(:,j,i),'-k','linewidth',3)
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% plot([1 options_.irf],[0 0],'-r','linewidth',0.5);
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box on
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axis tight
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xlim([1 options_.irf]);
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@ -135,7 +136,6 @@ for i=fpar:npar
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plot(1:options_.irf,HPDIRFdsgevar(:,1,j,i),'--k','linewidth',1)
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plot(1:options_.irf,HPDIRFdsgevar(:,2,j,i),'--k','linewidth',1)
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end
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% plot([1 options_.irf],[0 0],'-r','linewidth',0.5);
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box on
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axis tight
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xlim([1 options_.irf]);
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@ -155,9 +155,9 @@ for i=fpar:npar
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if subplotnum == MaxNumberOfPlotPerFigure || (j == nvar && subplotnum> 0)
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figunumber = figunumber+1;
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dyn_saveas(hh_fig,[DirectoryName '/' M_.fname '_Bayesian_IRF_' tit{i} '_' int2str(figunumber)],options_.nodisplay,options_.graph_format);
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dyn_saveas(hh_fig,[DirectoryName '/' fname '_Bayesian_IRF_' tit{i} '_' int2str(figunumber)],options_.nodisplay,options_.graph_format);
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if RemoteFlag==1
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OutputFileName = [OutputFileName; {[DirectoryName,filesep], [M_.fname '_Bayesian_IRF_' deblank(tit(i,:)) '_' int2str(figunumber) '.*']}];
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OutputFileName = [OutputFileName; {[DirectoryName,filesep], [fname '_Bayesian_IRF_' deblank(tit(i,:)) '_' int2str(figunumber) '.*']}];
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end
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subplotnum = 0;
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end
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@ -165,7 +165,6 @@ for i=fpar:npar
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if whoiam
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fprintf('Done! \n');
|
||||
waitbarString = [ 'Exog. shocks ' int2str(i) '/' int2str(npar) ' done.'];
|
||||
% fMessageStatus((i-fpar+1)/(npar-fpar+1),whoiam,waitbarString, waitbarTitle, Parallel(ThisMatlab));
|
||||
dyn_waitbar((i-fpar+1)/(npar-fpar+1),[],waitbarString);
|
||||
end
|
||||
end % loop over exo_var
|
||||
|
|
|
@ -1,10 +1,15 @@
|
|||
function ReshapeMatFiles(type, type2)
|
||||
% function ReshapeMatFiles(type, type2)
|
||||
function ReshapeMatFiles(fname, dname, exo_nbr, endo_nbr, options_, type, type2)
|
||||
% function ReshapeMatFiles(fname, dname, exo_nbr, endo_nbr, options_, type, type2)
|
||||
% Reshapes and sorts (along the mcmc simulations) the mat files generated by DYNARE.
|
||||
% 4D-arrays are splitted along the first dimension.
|
||||
% 3D-arrays are splitted along the second dimension.
|
||||
%
|
||||
% INPUTS:
|
||||
% fname: [string] filename
|
||||
% dname: [string] directory name
|
||||
% exo_nbr: [integer] number of exogenous variables
|
||||
% endo_nbr: [integer] number of endogenous variables
|
||||
% options_: [struct] options structure
|
||||
% type: statistics type in the repertory:
|
||||
% dgse
|
||||
% irf_bvardsge
|
||||
|
@ -25,7 +30,7 @@ function ReshapeMatFiles(type, type2)
|
|||
% SPECIAL REQUIREMENTS
|
||||
% none
|
||||
|
||||
% Copyright © 2003-2017 Dynare Team
|
||||
% Copyright © 2003-2023 Dynare Team
|
||||
%
|
||||
% This file is part of Dynare.
|
||||
%
|
||||
|
@ -42,43 +47,41 @@ function ReshapeMatFiles(type, type2)
|
|||
% You should have received a copy of the GNU General Public License
|
||||
% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
|
||||
|
||||
global M_ options_
|
||||
|
||||
if nargin==1
|
||||
MhDirectoryName = [ CheckPath('metropolis',M_.dname) filesep ];
|
||||
if nargin==6
|
||||
MhDirectoryName = [ CheckPath('metropolis',dname) filesep ];
|
||||
else
|
||||
if strcmpi(type2,'posterior')
|
||||
MhDirectoryName = [CheckPath('metropolis',M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath('metropolis',dname) filesep ];
|
||||
elseif strcmpi(type2,'gsa')
|
||||
if options_.opt_gsa.morris==1
|
||||
MhDirectoryName = [CheckPath('gsa/screen',M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath('gsa/screen',dname) filesep ];
|
||||
elseif options_.opt_gsa.morris==2
|
||||
MhDirectoryName = [CheckPath('gsa/identif',M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath('gsa/identif',dname) filesep ];
|
||||
elseif options_.opt_gsa.pprior
|
||||
MhDirectoryName = [CheckPath(['gsa' filesep 'prior'],M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath(['gsa' filesep 'prior'],dname) filesep ];
|
||||
else
|
||||
MhDirectoryName = [CheckPath(['gsa' filesep 'mc'],M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath(['gsa' filesep 'mc'],dname) filesep ];
|
||||
end
|
||||
else
|
||||
MhDirectoryName = [CheckPath('prior',M_.dname) filesep ];
|
||||
MhDirectoryName = [CheckPath('prior',dname) filesep ];
|
||||
end
|
||||
end
|
||||
switch type
|
||||
case 'irf_dsge'
|
||||
CAPtype = 'IRF_DSGE';
|
||||
TYPEsize = [ options_.irf , size(options_.varlist,1) , M_.exo_nbr ];
|
||||
TYPEsize = [ options_.irf , size(options_.varlist,1) , exo_nbr ];
|
||||
TYPEarray = 4;
|
||||
case 'irf_bvardsge'
|
||||
CAPtype = 'IRF_BVARDSGE';
|
||||
TYPEsize = [ options_.irf , length(options_.varobs) , M_.exo_nbr ];
|
||||
TYPEsize = [ options_.irf , length(options_.varobs) , exo_nbr ];
|
||||
TYPEarray = 4;
|
||||
case 'smooth'
|
||||
CAPtype = 'SMOOTH';
|
||||
TYPEsize = [ M_.endo_nbr , options_.nobs ];
|
||||
TYPEsize = [ endo_nbr , options_.nobs ];
|
||||
TYPEarray = 3;
|
||||
case 'filter'
|
||||
CAPtype = 'FILTER';
|
||||
TYPEsize = [ M_.endo_nbr , options_.nobs + 1 ];% TO BE CHECKED!
|
||||
TYPEsize = [ endo_nbr , options_.nobs + 1 ];% TO BE CHECKED!
|
||||
TYPEarray = 3;
|
||||
case 'error'
|
||||
CAPtype = 'ERROR';
|
||||
|
@ -86,22 +89,22 @@ switch type
|
|||
TYPEarray = 3;
|
||||
case 'innov'
|
||||
CAPtype = 'INNOV';
|
||||
TYPEsize = [ M_.exo_nbr , options_.nobs ];
|
||||
TYPEsize = [ exo_nbr , options_.nobs ];
|
||||
TYPEarray = 3;
|
||||
case 'forcst'
|
||||
CAPtype = 'FORCST';
|
||||
TYPEsize = [ M_.endo_nbr , options_.forecast ];
|
||||
TYPEsize = [ endo_nbr , options_.forecast ];
|
||||
TYPEarray = 3;
|
||||
case 'forcst1'
|
||||
CAPtype = 'FORCST1';
|
||||
TYPEsize = [ M_.endo_nbr , options_.forecast ];
|
||||
TYPEsize = [ endo_nbr , options_.forecast ];
|
||||
TYPEarray = 3;
|
||||
otherwise
|
||||
disp('ReshapeMatFiles :: Unknown argument!')
|
||||
return
|
||||
end
|
||||
|
||||
TYPEfiles = dir([MhDirectoryName M_.fname '_' type '*.mat']);
|
||||
TYPEfiles = dir([MhDirectoryName fname '_' type '*.mat']);
|
||||
NumberOfTYPEfiles = length(TYPEfiles);
|
||||
B = options_.B;
|
||||
|
||||
|
@ -116,36 +119,29 @@ switch TYPEarray
|
|||
for f1=1:NumberOfTYPEfiles-foffset
|
||||
eval(['STOCK_' CAPtype ' = zeros(NumberOfPeriodsPerTYPEfiles,TYPEsize(2),TYPEsize(3),B);'])
|
||||
for f2 = 1:NumberOfTYPEfiles
|
||||
load([MhDirectoryName M_.fname '_' type int2str(f2) '.mat']);
|
||||
load([MhDirectoryName fname '_' type int2str(f2) '.mat']);
|
||||
eval(['STOCK_' CAPtype '(:,:,1:+size(stock_' type ',3),idx+1:idx+size(stock_' type ',4))=stock_' ...
|
||||
type '(jdx+1:jdx+NumberOfPeriodsPerTYPEfiles,:,:,:);'])
|
||||
eval(['idx = idx + size(stock_' type ',4);'])
|
||||
end
|
||||
%eval(['STOCK_' CAPtype ' = sort(STOCK_' CAPtype ',4);'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(f1) '.mat'],['STOCK_' CAPtype]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(f1) '.mat'],['STOCK_' CAPtype]);
|
||||
jdx = jdx + NumberOfPeriodsPerTYPEfiles;
|
||||
idx = 0;
|
||||
end
|
||||
if reste
|
||||
eval(['STOCK_' CAPtype ' = zeros(reste,TYPEsize(2),TYPEsize(3),B);'])
|
||||
for f2 = 1:NumberOfTYPEfiles
|
||||
load([MhDirectoryName M_.fname '_' type int2str(f2) '.mat']);
|
||||
load([MhDirectoryName fname '_' type int2str(f2) '.mat']);
|
||||
eval(['STOCK_' CAPtype '(:,:,:,idx+1:idx+size(stock_' type ',4))=stock_' type '(jdx+1:jdx+reste,:,:,:);'])
|
||||
eval(['idx = idx + size(stock_' type ',4);'])
|
||||
end
|
||||
%eval(['STOCK_' CAPtype ' = sort(STOCK_' CAPtype ',4);'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(NumberOfTYPEfiles-foffset+1) '.mat'],['STOCK_' CAPtype]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(NumberOfTYPEfiles-foffset+1) '.mat'],['STOCK_' CAPtype]);
|
||||
end
|
||||
else
|
||||
load([MhDirectoryName M_.fname '_' type '1.mat']);
|
||||
%eval(['STOCK_' CAPtype ' = sort(stock_' type ',4);'])
|
||||
load([MhDirectoryName fname '_' type '1.mat']);
|
||||
eval(['STOCK_' CAPtype ' = stock_' type ';'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(1) '.mat'],['STOCK_' CAPtype ]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(1) '.mat'],['STOCK_' CAPtype ]);
|
||||
end
|
||||
% Original file format may be useful in some cases...
|
||||
% for file = 1:NumberOfTYPEfiles
|
||||
% delete([MhDirectoryName M_.fname '_' type int2str(file) '.mat'])
|
||||
% end
|
||||
case 3
|
||||
if NumberOfTYPEfiles>1
|
||||
NumberOfPeriodsPerTYPEfiles = ceil( TYPEsize(2)/NumberOfTYPEfiles );
|
||||
|
@ -155,31 +151,24 @@ switch TYPEarray
|
|||
for f1=1:NumberOfTYPEfiles-1
|
||||
eval(['STOCK_' CAPtype ' = zeros(TYPEsize(1),NumberOfPeriodsPerTYPEfiles,B);'])
|
||||
for f2 = 1:NumberOfTYPEfiles
|
||||
load([MhDirectoryName M_.fname '_' type int2str(f2) '.mat']);
|
||||
load([MhDirectoryName fname '_' type int2str(f2) '.mat']);
|
||||
eval(['STOCK_' CAPtype '(:,:,idx+1:idx+size(stock_ ' type ',3))=stock_' type '(:,jdx+1:jdx+NumberOfPeriodsPerTYPEfiles,:);'])
|
||||
eval(['idx = idx + size(stock_' type ',3);'])
|
||||
end
|
||||
%eval(['STOCK_' CAPtype ' = sort(STOCK_' CAPtype ',3);'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(f1) '.mat'],['STOCK_' CAPtype]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(f1) '.mat'],['STOCK_' CAPtype]);
|
||||
jdx = jdx + NumberOfPeriodsPerTYPEfiles;
|
||||
idx = 0;
|
||||
end
|
||||
eval(['STOCK_' CAPtype ' = zeros(TYPEsize(1),reste,B);'])
|
||||
for f2 = 1:NumberOfTYPEfiles
|
||||
load([MhDirectoryName M_.fname '_' type int2str(f2) '.mat']);
|
||||
load([MhDirectoryName fname '_' type int2str(f2) '.mat']);
|
||||
eval(['STOCK_' CAPtype '(:,:,idx+1:idx+size(stock_' type ',3))=stock_' type '(:,jdx+1:jdx+reste,:);'])
|
||||
eval(['idx = idx + size(stock_' type ',3);'])
|
||||
end
|
||||
%eval(['STOCK_' CAPtype ' = sort(STOCK_' CAPtype ',3);'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(NumberOfTYPEfiles) '.mat'],['STOCK_' CAPtype]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(NumberOfTYPEfiles) '.mat'],['STOCK_' CAPtype]);
|
||||
else
|
||||
load([MhDirectoryName M_.fname '_' type '1.mat']);
|
||||
%eval(['STOCK_' CAPtype ' = sort(stock_' type ',3);'])
|
||||
load([MhDirectoryName fname '_' type '1.mat']);
|
||||
eval(['STOCK_' CAPtype ' = stock_' type ';'])
|
||||
save([MhDirectoryName M_.fname '_' CAPtype 's' int2str(1) '.mat'],['STOCK_' CAPtype ]);
|
||||
save([MhDirectoryName fname '_' CAPtype 's' int2str(1) '.mat'],['STOCK_' CAPtype ]);
|
||||
end
|
||||
% Original file format may be useful in some cases...
|
||||
% for file = 1:NumberOfTYPEfiles
|
||||
% delete([MhDirectoryName M_.fname '_' type int2str(file) '.mat'])
|
||||
% end
|
||||
end
|
|
@ -225,70 +225,70 @@ if ~isequal(options_.mode_compute,0) && ~options_.mh_posterior_mode_estimation
|
|||
current_optimizer = optimizer_vec{optim_iter};
|
||||
|
||||
[xparam1, fval, ~, hh, options_, Scale, new_rat_hess_info] = dynare_minimize_objective(objective_function,xparam1,current_optimizer,options_,[bounds.lb bounds.ub],bayestopt_.name,bayestopt_,hh,dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,bounds,oo_);
|
||||
fprintf('\nFinal value of minus the log posterior (or likelihood):%f \n', fval);
|
||||
fprintf('\nFinal value of minus the log posterior (or likelihood):%f \n', fval);
|
||||
|
||||
if isnumeric(current_optimizer)
|
||||
if current_optimizer==5
|
||||
newratflag = new_rat_hess_info.newratflag;
|
||||
new_rat_hess_info = new_rat_hess_info.new_rat_hess_info;
|
||||
newratflag = new_rat_hess_info.newratflag;
|
||||
new_rat_hess_info = new_rat_hess_info.new_rat_hess_info;
|
||||
elseif current_optimizer==6 %save scaling factor
|
||||
save([M_.dname filesep 'Output' filesep M_.fname '_optimal_mh_scale_parameter.mat'],'Scale');
|
||||
options_.mh_jscale = Scale;
|
||||
bayestopt_.jscale(:) = options_.mh_jscale;
|
||||
end
|
||||
save([M_.dname filesep 'Output' filesep M_.fname '_optimal_mh_scale_parameter.mat'],'Scale');
|
||||
options_.mh_jscale = Scale;
|
||||
bayestopt_.jscale(:) = options_.mh_jscale;
|
||||
end
|
||||
end
|
||||
if ~isnumeric(current_optimizer) || ~isequal(current_optimizer,6) %always already computes covariance matrix
|
||||
if options_.cova_compute == 1 %user did not request covariance not to be computed
|
||||
if options_.analytic_derivation && strcmp(func2str(objective_function),'dsge_likelihood')
|
||||
ana_deriv_old = options_.analytic_derivation;
|
||||
options_.analytic_derivation = 2;
|
||||
[~,~,~,~,hh] = feval(objective_function,xparam1, ...
|
||||
dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,bounds,oo_);
|
||||
options_.analytic_derivation = ana_deriv_old;
|
||||
if options_.cova_compute == 1 %user did not request covariance not to be computed
|
||||
if options_.analytic_derivation && strcmp(func2str(objective_function),'dsge_likelihood')
|
||||
ana_deriv_old = options_.analytic_derivation;
|
||||
options_.analytic_derivation = 2;
|
||||
[~,~,~,~,hh] = feval(objective_function,xparam1, ...
|
||||
dataset_,dataset_info,options_,M_,estim_params_,bayestopt_,bounds,oo_);
|
||||
options_.analytic_derivation = ana_deriv_old;
|
||||
elseif ~isnumeric(current_optimizer) || ~(isequal(current_optimizer,5) && newratflag~=1 && strcmp(func2str(objective_function),'dsge_likelihood'))
|
||||
% enter here if i) not mode_compute_5, ii) if mode_compute_5 and newratflag==1;
|
||||
% with flag==0 or 2 and dsge_likelihood, we force to use
|
||||
% the hessian from outer product gradient of optimizer 5 below
|
||||
if options_.hessian.use_penalized_objective
|
||||
penalized_objective_function = str2func('penalty_objective_function');
|
||||
hh = hessian(penalized_objective_function, xparam1, options_.gstep, objective_function, fval, dataset_, dataset_info, options_, M_, estim_params_, bayestopt_, bounds,oo_);
|
||||
else
|
||||
hh = hessian(objective_function, xparam1, options_.gstep, dataset_, dataset_info, options_, M_, estim_params_, bayestopt_, bounds,oo_);
|
||||
end
|
||||
hh = reshape(hh, nx, nx);
|
||||
elseif isnumeric(current_optimizer) && isequal(current_optimizer,5)
|
||||
% other numerical hessian options available with optimizer
|
||||
% 5 and dsge_likelihood
|
||||
%
|
||||
% if newratflag == 0
|
||||
% compute outer product gradient of optimizer 5
|
||||
%
|
||||
% if newratflag == 2
|
||||
% compute 'mixed' outer product gradient of optimizer 5
|
||||
% with diagonal elements computed with numerical second order derivatives
|
||||
%
|
||||
% uses univariate filters, so to get max # of available
|
||||
% densities for outer product gradient
|
||||
kalman_algo0 = options_.kalman_algo;
|
||||
compute_hessian = 1;
|
||||
if ~((options_.kalman_algo == 2) || (options_.kalman_algo == 4))
|
||||
options_.kalman_algo=2;
|
||||
if options_.lik_init == 3
|
||||
options_.kalman_algo=4;
|
||||
end
|
||||
elseif newratflag==0 % hh already contains outer product gradient with univariate filter
|
||||
compute_hessian = 0;
|
||||
end
|
||||
if compute_hessian
|
||||
crit = options_.newrat.tolerance.f;
|
||||
newratflag = newratflag>0;
|
||||
hh = reshape(mr_hessian(xparam1,objective_function,fval,newratflag,crit,new_rat_hess_info,[bounds.lb bounds.ub],bayestopt_.p2,0,dataset_, dataset_info, options_,M_,estim_params_,bayestopt_,bounds,oo_), nx, nx);
|
||||
end
|
||||
options_.kalman_algo = kalman_algo0;
|
||||
% enter here if i) not mode_compute_5, ii) if mode_compute_5 and newratflag==1;
|
||||
% with flag==0 or 2 and dsge_likelihood, we force to use
|
||||
% the hessian from outer product gradient of optimizer 5 below
|
||||
if options_.hessian.use_penalized_objective
|
||||
penalized_objective_function = str2func('penalty_objective_function');
|
||||
hh = hessian(penalized_objective_function, xparam1, options_.gstep, objective_function, fval, dataset_, dataset_info, options_, M_, estim_params_, bayestopt_, bounds,oo_);
|
||||
else
|
||||
hh = hessian(objective_function, xparam1, options_.gstep, dataset_, dataset_info, options_, M_, estim_params_, bayestopt_, bounds,oo_);
|
||||
end
|
||||
hh = reshape(hh, nx, nx);
|
||||
elseif isnumeric(current_optimizer) && isequal(current_optimizer,5)
|
||||
% other numerical hessian options available with optimizer
|
||||
% 5 and dsge_likelihood
|
||||
%
|
||||
% if newratflag == 0
|
||||
% compute outer product gradient of optimizer 5
|
||||
%
|
||||
% if newratflag == 2
|
||||
% compute 'mixed' outer product gradient of optimizer 5
|
||||
% with diagonal elements computed with numerical second order derivatives
|
||||
%
|
||||
% uses univariate filters, so to get max # of available
|
||||
% densities for outer product gradient
|
||||
kalman_algo0 = options_.kalman_algo;
|
||||
compute_hessian = 1;
|
||||
if ~((options_.kalman_algo == 2) || (options_.kalman_algo == 4))
|
||||
options_.kalman_algo=2;
|
||||
if options_.lik_init == 3
|
||||
options_.kalman_algo=4;
|
||||
end
|
||||
elseif newratflag==0 % hh already contains outer product gradient with univariate filter
|
||||
compute_hessian = 0;
|
||||
end
|
||||
if compute_hessian
|
||||
crit = options_.newrat.tolerance.f;
|
||||
newratflag = newratflag>0;
|
||||
hh = reshape(mr_hessian(xparam1,objective_function,fval,newratflag,crit,new_rat_hess_info,[bounds.lb bounds.ub],bayestopt_.p2,0,dataset_, dataset_info, options_,M_,estim_params_,bayestopt_,bounds,oo_), nx, nx);
|
||||
end
|
||||
options_.kalman_algo = kalman_algo0;
|
||||
end
|
||||
end
|
||||
parameter_names = bayestopt_.name;
|
||||
end
|
||||
parameter_names = bayestopt_.name;
|
||||
end
|
||||
if options_.cova_compute || current_optimizer==5 || current_optimizer==6
|
||||
save([M_.dname filesep 'Output' filesep M_.fname '_mode.mat'],'xparam1','hh','parameter_names','fval');
|
||||
|
@ -472,7 +472,7 @@ if (any(bayestopt_.pshape >0 ) && options_.mh_replic) || ...
|
|||
if error_flag
|
||||
error('%s: I cannot compute the posterior IRFs!',dispString)
|
||||
end
|
||||
PosteriorIRF('posterior',dispString);
|
||||
oo_=PosteriorIRF('posterior',options_,estim_params_,oo_,M_,bayestopt_,dataset_,dataset_info,dispString);
|
||||
end
|
||||
if options_.moments_varendo
|
||||
if error_flag
|
||||
|
@ -504,7 +504,7 @@ if (any(bayestopt_.pshape >0 ) && options_.mh_replic) || ...
|
|||
error('%s: I cannot compute the posterior statistics!',dispString)
|
||||
end
|
||||
if options_.order==1 && ~options_.particle.status
|
||||
prior_posterior_statistics('posterior',dataset_,dataset_info,dispString); %get smoothed and filtered objects and forecasts
|
||||
oo_=prior_posterior_statistics('posterior',dataset_,dataset_info,M_,oo_,options_,estim_params_,bayestopt_,dispString); %get smoothed and filtered objects and forecasts
|
||||
else
|
||||
error('%s: Particle Smoothers are not yet implemented.',dispString)
|
||||
end
|
||||
|
|
|
@ -410,9 +410,9 @@ if options_gsa.rmse
|
|||
end
|
||||
|
||||
end
|
||||
prior_posterior_statistics('gsa',dataset_, dataset_info,'gsa::mcmc');
|
||||
oo_=prior_posterior_statistics('gsa',dataset_, dataset_info,M_,oo_,options_,estim_params_,bayestopt_,'gsa::mcmc');
|
||||
if options_.bayesian_irf
|
||||
PosteriorIRF('gsa','gsa::mcmc');
|
||||
oo_=PosteriorIRF('gsa',options_,estim_params_,oo_,M_,bayestopt_,dataset_,dataset_info,'gsa::mcmc');
|
||||
end
|
||||
options_gsa.load_rmse=0;
|
||||
% else
|
||||
|
|
32
matlab/pm3.m
32
matlab/pm3.m
|
@ -1,4 +1,4 @@
|
|||
function pm3(n1,n2,ifil,B,tit1,tit2,tit3,tit_tex,names1,names2,name3,DirectoryName,var_type,dispString)
|
||||
function oo_=pm3(M_,options_,oo_,n1,n2,ifil,B,tit1,tit2,tit_tex,names1,names2,name3,DirectoryName,var_type,dispString)
|
||||
|
||||
% Computes, stores and plots the posterior moment statistics.
|
||||
%
|
||||
|
@ -8,8 +8,7 @@ function pm3(n1,n2,ifil,B,tit1,tit2,tit3,tit_tex,names1,names2,name3,DirectoryNa
|
|||
% ifil [scalar] number of moment files to load
|
||||
% B [scalar] number of subdraws
|
||||
% tit1 [string] Figure title
|
||||
% tit2 [string] not used
|
||||
% tit3 [string] Save name for figure
|
||||
% tit2 [string] Save name for figure
|
||||
% tit_tex [cell array] TeX-Names for Variables
|
||||
% names1 [cell array] Names of all variables in the moment matrix from
|
||||
% which names2 is selected
|
||||
|
@ -20,6 +19,10 @@ function pm3(n1,n2,ifil,B,tit1,tit2,tit3,tit_tex,names1,names2,name3,DirectoryNa
|
|||
% var_type [string] suffix of the filename from which to load moment
|
||||
% matrix
|
||||
% dispString [string] string to be displayes in the command window
|
||||
%
|
||||
% OUTPUTS
|
||||
% oo_ [structure] storing the results
|
||||
|
||||
|
||||
% PARALLEL CONTEXT
|
||||
% See also the comment in posterior_sampler.m funtion.
|
||||
|
@ -42,8 +45,6 @@ function pm3(n1,n2,ifil,B,tit1,tit2,tit3,tit_tex,names1,names2,name3,DirectoryNa
|
|||
% You should have received a copy of the GNU General Public License
|
||||
% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
|
||||
|
||||
global options_ M_ oo_
|
||||
|
||||
nn = 3;
|
||||
MaxNumberOfPlotsPerFigure = nn^2; % must be square
|
||||
varlist = names2;
|
||||
|
@ -284,9 +285,7 @@ if strcmp(var_type,'_trend_coeff') || max(max(abs(Mean(:,:))))<=10^(-6) || all(a
|
|||
fprintf(['%s: ' tit1 ', done!\n'],dispString);
|
||||
return %not do plots
|
||||
end
|
||||
%%
|
||||
%% Finally I build the plots.
|
||||
%%
|
||||
|
||||
if ~options_.nograph && ~options_.no_graph.posterior
|
||||
% Block of code executed in parallel, with the exception of file
|
||||
|
@ -297,8 +296,6 @@ if ~options_.nograph && ~options_.no_graph.posterior
|
|||
%
|
||||
% %%% The file .TeX! are not saved in parallel.
|
||||
|
||||
|
||||
|
||||
% Store the variable mandatory for local/remote parallel computing.
|
||||
|
||||
localVars=[];
|
||||
|
@ -313,8 +310,14 @@ if ~options_.nograph && ~options_.no_graph.posterior
|
|||
end
|
||||
localVars.MaxNumberOfPlotsPerFigure=MaxNumberOfPlotsPerFigure;
|
||||
localVars.name3=name3;
|
||||
localVars.tit3=tit3;
|
||||
localVars.tit2=tit2;
|
||||
localVars.Mean=Mean;
|
||||
localVars.TeX=options_.TeX;
|
||||
localVars.nodisplay=options_.nodisplay;
|
||||
localVars.graph_format=options_.graph_format;
|
||||
localVars.dname=M_.dname;
|
||||
localVars.fname=M_.fname;
|
||||
|
||||
% Like sequential execution!
|
||||
nvar0=nvar;
|
||||
|
||||
|
@ -332,16 +335,13 @@ if ~options_.nograph && ~options_.no_graph.posterior
|
|||
if isRemoteOctave
|
||||
fout = pm3_core(localVars,1,nvar,0);
|
||||
else
|
||||
globalVars = struct('M_',M_, ...
|
||||
'options_', options_, ...
|
||||
'oo_', oo_);
|
||||
globalVars = [];
|
||||
[fout, nvar0, totCPU] = masterParallel(options_.parallel, 1, nvar, [],'pm3_core', localVars,globalVars, options_.parallel_info);
|
||||
end
|
||||
end
|
||||
else
|
||||
% For the time being in Octave enviroment the pm3.m is executed only in
|
||||
% serial modality, to avoid problem with the plots.
|
||||
|
||||
fout = pm3_core(localVars,1,nvar,0);
|
||||
end
|
||||
|
||||
|
@ -365,8 +365,8 @@ if ~options_.nograph && ~options_.no_graph.posterior
|
|||
if subplotnum == MaxNumberOfPlotsPerFigure || i == nvar
|
||||
fprintf(fidTeX,'\\begin{figure}[H]\n');
|
||||
fprintf(fidTeX,'\\centering \n');
|
||||
fprintf(fidTeX,['\\includegraphics[width=%2.2f\\textwidth]{%s/Output/%s_' name3 '_%s}\n'],options_.figures.textwidth*min(subplotnum/nn,1),M_.dname,M_.fname, tit3{i});
|
||||
fprintf(fidTeX,'\\label{Fig:%s:%s}\n',name3,tit3{i});
|
||||
fprintf(fidTeX,['\\includegraphics[width=%2.2f\\textwidth]{%s/Output/%s_' name3 '_%s}\n'],options_.figures.textwidth*min(subplotnum/nn,1),M_.dname,M_.fname, tit2{i});
|
||||
fprintf(fidTeX,'\\label{Fig:%s:%s}\n',name3,tit2{i});
|
||||
fprintf(fidTeX,'\\caption{%s}\n',tit1);
|
||||
fprintf(fidTeX,'\\end{figure}\n');
|
||||
fprintf(fidTeX,' \n');
|
||||
|
|
|
@ -1,13 +1,23 @@
|
|||
function myoutput=pm3_core(myinputs,fpar,nvar,whoiam, ThisMatlab)
|
||||
|
||||
% myoutput=pm3_core(myinputs,fpar,nvar,whoiam, ThisMatlab)
|
||||
% PARALLEL CONTEXT
|
||||
% Core functionality for pm3.m function, which can be parallelized.
|
||||
|
||||
% INPUTS
|
||||
% See the comment in posterior_sampler_core.m funtion.
|
||||
|
||||
% o myimput [struc] The mandatory variables for local/remote
|
||||
% parallel computing obtained from prior_posterior_statistics.m
|
||||
% function.
|
||||
% o fpar and nvar [integer] first variable and number of variables
|
||||
% o whoiam [integer] In concurrent programming a modality to refer to the different threads running in parallel is needed.
|
||||
% The integer whoaim is the integer that
|
||||
% allows us to distinguish between them. Then it is the index number of this CPU among all CPUs in the
|
||||
% cluster.
|
||||
% o ThisMatlab [integer] Allows us to distinguish between the
|
||||
% 'main' Matlab, the slave Matlab worker, local Matlab, remote Matlab,
|
||||
% ... Then it is the index number of this slave machine in the cluster.
|
||||
%
|
||||
% OUTPUTS
|
||||
% o myoutput [struc]
|
||||
% o myoutput [struct] Contains file names
|
||||
%
|
||||
%
|
||||
% SPECIAL REQUIREMENTS.
|
||||
|
@ -45,16 +55,18 @@ varlist=myinputs.varlist;
|
|||
|
||||
MaxNumberOfPlotsPerFigure=myinputs.MaxNumberOfPlotsPerFigure;
|
||||
name3=myinputs.name3;
|
||||
tit3=myinputs.tit3;
|
||||
tit2=myinputs.tit2;
|
||||
Mean=myinputs.Mean;
|
||||
options_.TeX=myinputs.TeX;
|
||||
options_.nodisplay=myinputs.nodisplay;
|
||||
options_.graph_format=myinputs.graph_format;
|
||||
fname=myinputs.fname;
|
||||
dname=myinputs.dname;
|
||||
|
||||
if whoiam
|
||||
Parallel=myinputs.Parallel;
|
||||
end
|
||||
|
||||
|
||||
global options_ M_ oo_
|
||||
|
||||
if options_.TeX
|
||||
varlist_TeX=myinputs.varlist_TeX;
|
||||
end
|
||||
|
@ -64,8 +76,6 @@ if whoiam
|
|||
h = dyn_waitbar(prct0,'Parallel plots pm3 ...');
|
||||
end
|
||||
|
||||
|
||||
|
||||
figunumber = 0;
|
||||
subplotnum = 0;
|
||||
hh_fig = dyn_figure(options_.nodisplay,'Name',[tit1 ' ' int2str(figunumber+1)]);
|
||||
|
@ -110,14 +120,14 @@ for i=fpar:nvar
|
|||
|
||||
if whoiam
|
||||
if Parallel(ThisMatlab).Local==0
|
||||
DirectoryName = CheckPath('Output',M_.dname);
|
||||
DirectoryName = CheckPath('Output',dname);
|
||||
end
|
||||
end
|
||||
|
||||
if subplotnum == MaxNumberOfPlotsPerFigure || i == nvar
|
||||
dyn_saveas(hh_fig,[M_.dname '/Output/' M_.fname '_' name3 '_' tit3{i}],options_.nodisplay,options_.graph_format);
|
||||
dyn_saveas(hh_fig,[dname '/Output/' fname '_' name3 '_' tit2{i}],options_.nodisplay,options_.graph_format);
|
||||
if RemoteFlag==1
|
||||
OutputFileName = [OutputFileName; {[M_.dname, filesep, 'Output',filesep], [M_.fname '_' name3 '_' deblank(tit3(i,:)) '.*']}];
|
||||
OutputFileName = [OutputFileName; {[dname, filesep, 'Output',filesep], [fname '_' name3 '_' deblank(tit2(i,:)) '.*']}];
|
||||
end
|
||||
subplotnum = 0;
|
||||
figunumber = figunumber+1;
|
||||
|
@ -127,12 +137,8 @@ for i=fpar:nvar
|
|||
end
|
||||
|
||||
if whoiam
|
||||
% waitbarString = [ 'Variable ' int2str(i) '/' int2str(nvar) ' done.'];
|
||||
% fMessageStatus((i-fpar+1)/(nvar-fpar+1),whoiam,waitbarString, waitbarTitle, Parallel(ThisMatlab));
|
||||
dyn_waitbar((i-fpar+1)/(nvar-fpar+1),h);
|
||||
end
|
||||
|
||||
|
||||
end
|
||||
|
||||
if whoiam
|
||||
|
|
|
@ -1,17 +1,19 @@
|
|||
function prior_posterior_statistics(type,dataset,dataset_info,dispString)
|
||||
% function prior_posterior_statistics(type,dataset,dataset_info,dispString)
|
||||
function oo_=prior_posterior_statistics(type,dataset_,dataset_info,M_,oo_,options_,estim_params_,bayestopt_,dispString)
|
||||
% oo_=prior_posterior_statistics(type,dataset_,dataset_info,M_,oo_,options_,estim_params_,bayestopt_,dispString))
|
||||
% Computes Monte Carlo filter smoother and forecasts
|
||||
%
|
||||
% INPUTS
|
||||
% type: posterior
|
||||
% prior
|
||||
% gsa
|
||||
% dataset: data structure
|
||||
% dataset_info: dataset structure
|
||||
% dispString: string to display in the command window
|
||||
%
|
||||
% type [string] posterior, prior, or gsa
|
||||
% o dataset_ [structure] storing the dataset
|
||||
% o dataset_info [structure] Various information about the dataset
|
||||
% o M_ [structure] storing the model information
|
||||
% o oo_ [structure] storing the results
|
||||
% o options_ [structure] storing the options
|
||||
% o estim_params_ [structure] storing information about estimated parameters
|
||||
% o bayestopt_ [structure] storing information about priors
|
||||
% dispString: [string] display info in the command window
|
||||
% OUTPUTS
|
||||
% none
|
||||
% oo_: [structure] storing the results
|
||||
%
|
||||
% SPECIAL REQUIREMENTS
|
||||
% none
|
||||
|
@ -37,36 +39,23 @@ function prior_posterior_statistics(type,dataset,dataset_info,dispString)
|
|||
% You should have received a copy of the GNU General Public License
|
||||
% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
|
||||
|
||||
if nargin < 4
|
||||
if nargin < 9
|
||||
dispString = 'prior_posterior_statistics';
|
||||
end
|
||||
|
||||
global options_ estim_params_ oo_ M_ bayestopt_
|
||||
|
||||
localVars=[];
|
||||
|
||||
Y = transpose(dataset.data);
|
||||
gend = dataset.nobs;
|
||||
data_index = dataset_info.missing.aindex;
|
||||
missing_value = dataset_info.missing.state;
|
||||
mean_varobs = dataset_info.descriptive.mean;
|
||||
Y = transpose(dataset_.data);
|
||||
gend = dataset_.nobs;
|
||||
|
||||
|
||||
nvx = estim_params_.nvx;
|
||||
nvn = estim_params_.nvn;
|
||||
ncx = estim_params_.ncx;
|
||||
ncn = estim_params_.ncn;
|
||||
np = estim_params_.np ;
|
||||
npar = nvx+nvn+ncx+ncn+np;
|
||||
npar = estim_params_.nvx+nvn+estim_params_.ncx+estim_params_.ncn+estim_params_.np;
|
||||
naK = length(options_.filter_step_ahead);
|
||||
|
||||
MaxNumberOfBytes=options_.MaxNumberOfBytes;
|
||||
endo_nbr=M_.endo_nbr;
|
||||
exo_nbr=M_.exo_nbr;
|
||||
meas_err_nbr=length(M_.Correlation_matrix_ME);
|
||||
iendo = 1:endo_nbr;
|
||||
horizon = options_.forecast;
|
||||
IdObs = bayestopt_.mfys;
|
||||
if horizon
|
||||
i_last_obs = gend+(1-M_.maximum_endo_lag:0);
|
||||
end
|
||||
|
@ -130,13 +119,6 @@ varlist = options_.varlist;
|
|||
if isempty(varlist)
|
||||
varlist = sort(M_.endo_names(1:M_.orig_endo_nbr));
|
||||
end
|
||||
nvar = length(varlist);
|
||||
SelecVariables = [];
|
||||
for i=1:nvar
|
||||
if ~isempty(strmatch(varlist{i}, M_.endo_names, 'exact'))
|
||||
SelecVariables = [SelecVariables; strmatch(varlist{i}, M_.endo_names, 'exact')];
|
||||
end
|
||||
end
|
||||
|
||||
n_variables_to_fill=13;
|
||||
|
||||
|
@ -171,17 +153,17 @@ localVars.filter_covariance=filter_covariance;
|
|||
localVars.smoothed_state_uncertainty=smoothed_state_uncertainty;
|
||||
localVars.gend=gend;
|
||||
localVars.Y=Y;
|
||||
localVars.data_index=data_index;
|
||||
localVars.missing_value=missing_value;
|
||||
localVars.data_index=dataset_info.missing.aindex;
|
||||
localVars.missing_value=dataset_info.missing.state;
|
||||
localVars.varobs=options_.varobs;
|
||||
localVars.mean_varobs=mean_varobs;
|
||||
localVars.mean_varobs=dataset_info.descriptive.mean;
|
||||
localVars.irun=irun;
|
||||
localVars.endo_nbr=endo_nbr;
|
||||
localVars.nvn=nvn;
|
||||
localVars.naK=naK;
|
||||
localVars.horizon=horizon;
|
||||
localVars.iendo=iendo;
|
||||
localVars.IdObs=IdObs;
|
||||
localVars.iendo=1:endo_nbr;
|
||||
localVars.IdObs=bayestopt_.mfys;
|
||||
if horizon
|
||||
localVars.i_last_obs=i_last_obs;
|
||||
localVars.MAX_nforc1=MAX_nforc1;
|
||||
|
@ -212,6 +194,13 @@ localVars.MAX_momentsno = MAX_momentsno;
|
|||
localVars.ifil=ifil;
|
||||
localVars.DirectoryName = DirectoryName;
|
||||
|
||||
localVars.M_=M_;
|
||||
localVars.oo_=oo_;
|
||||
localVars.options_=options_;
|
||||
localVars.estim_params_=estim_params_;
|
||||
localVars.bayestopt_=bayestopt_;
|
||||
|
||||
|
||||
if strcmpi(type,'posterior')
|
||||
record=load_last_mh_history_file(DirectoryName, M_.fname);
|
||||
[nblck, npar] = size(record.LastParameters);
|
||||
|
@ -290,11 +279,7 @@ else
|
|||
end
|
||||
end
|
||||
localVars.ifil = ifil;
|
||||
globalVars = struct('M_',M_, ...
|
||||
'options_', options_, ...
|
||||
'bayestopt_', bayestopt_, ...
|
||||
'estim_params_', estim_params_, ...
|
||||
'oo_', oo_);
|
||||
globalVars = [];
|
||||
% which files have to be copied to run remotely
|
||||
NamFileInput(1,:) = {'',[M_.fname '.static.m']};
|
||||
NamFileInput(2,:) = {'',[M_.fname '.dynamic.m']};
|
||||
|
@ -330,28 +315,28 @@ if ~isnumeric(options_.parallel)
|
|||
end
|
||||
|
||||
if options_.smoother
|
||||
pm3(endo_nbr,gend,ifil(1),B,'Smoothed variables',...
|
||||
'',varlist, M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,gend,ifil(1),B,'Smoothed variables',...
|
||||
varlist, M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'SmoothedVariables',DirectoryName,'_smooth',dispString);
|
||||
pm3(exo_nbr,gend,ifil(2),B,'Smoothed shocks',...
|
||||
'',M_.exo_names,M_.exo_names_tex,M_.exo_names,...
|
||||
oo_=pm3(M_,options_,oo_,exo_nbr,gend,ifil(2),B,'Smoothed shocks',...
|
||||
M_.exo_names,M_.exo_names_tex,M_.exo_names,...
|
||||
M_.exo_names,'SmoothedShocks',DirectoryName,'_inno',dispString);
|
||||
pm3(endo_nbr,1,ifil(9),B,'Trend_coefficients',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,1,ifil(9),B,'Trend_coefficients',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'TrendCoeff',DirectoryName,'_trend_coeff',dispString);
|
||||
pm3(endo_nbr,gend,ifil(10),B,'Smoothed constant',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,gend,ifil(10),B,'Smoothed constant',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'Constant',DirectoryName,'_smoothed_constant',dispString);
|
||||
pm3(endo_nbr,gend,ifil(11),B,'Smoothed trend',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,gend,ifil(11),B,'Smoothed trend',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'Trend',DirectoryName,'_smoothed_trend',dispString);
|
||||
pm3(endo_nbr,gend,ifil(1),B,'Updated Variables',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,gend,ifil(1),B,'Updated Variables',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'UpdatedVariables',DirectoryName, ...
|
||||
'_update',dispString);
|
||||
if smoothed_state_uncertainty
|
||||
pm3(endo_nbr,endo_nbr,ifil(13),B,'State Uncertainty',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,endo_nbr,ifil(13),B,'State Uncertainty',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'StateUncertainty',DirectoryName,'_state_uncert',dispString);
|
||||
end
|
||||
|
||||
|
@ -360,24 +345,24 @@ if options_.smoother
|
|||
meas_error_names{obs_iter,1}=['SE_EOBS_' M_.endo_names{strmatch(options_.varobs{obs_iter},M_.endo_names,'exact')}];
|
||||
texnames{obs_iter,1}=['\sigma^{ME}_' M_.endo_names_tex{strmatch(options_.varobs{obs_iter},M_.endo_names,'exact')}];
|
||||
end
|
||||
pm3(meas_err_nbr,gend,ifil(3),B,'Smoothed measurement errors',...
|
||||
'',meas_error_names,texnames,meas_error_names,...
|
||||
meas_error_names,'SmoothedMeasurementErrors',DirectoryName,'_error',dispString)
|
||||
oo_=pm3(M_,options_,oo_,meas_err_nbr,gend,ifil(3),B,'Smoothed measurement errors',...
|
||||
meas_error_names,texnames,meas_error_names,...
|
||||
meas_error_names,'SmoothedMeasurementErrors',DirectoryName,'_error',dispString);
|
||||
end
|
||||
end
|
||||
|
||||
if options_.filtered_vars
|
||||
pm3(endo_nbr,gend,ifil(4),B,'One step ahead forecast (filtered variables)',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,gend,ifil(4),B,'One step ahead forecast (filtered variables)',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'FilteredVariables',DirectoryName,'_filter_step_ahead',dispString);
|
||||
end
|
||||
|
||||
if options_.forecast
|
||||
pm3(endo_nbr,horizon,ifil(6),B,'Forecasted variables (mean)',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,horizon,ifil(6),B,'Forecasted variables (mean)',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'MeanForecast',DirectoryName,'_forc_mean',dispString);
|
||||
pm3(endo_nbr,horizon,ifil(7),B,'Forecasted variables (point)',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,horizon,ifil(7),B,'Forecasted variables (point)',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'PointForecast',DirectoryName,'_forc_point',dispString);
|
||||
if ~isequal(M_.H,0) && ~isempty(intersect(options_.varobs,varlist))
|
||||
texnames = cell(length(options_.varobs), 1);
|
||||
|
@ -387,15 +372,15 @@ if options_.forecast
|
|||
texnames{obs_iter}=M_.endo_names_tex{strmatch(options_.varobs{obs_iter},M_.endo_names,'exact')};
|
||||
end
|
||||
varlist_forecast_ME=intersect(options_.varobs,varlist);
|
||||
pm3(meas_err_nbr,horizon,ifil(12),B,'Forecasted variables (point) with ME',...
|
||||
'',varlist_forecast_ME,texnames,obs_names,...
|
||||
varlist_forecast_ME,'PointForecastME',DirectoryName,'_forc_point_ME',dispString)
|
||||
oo_=pm3(M_,options_,oo_,meas_err_nbr,horizon,ifil(12),B,'Forecasted variables (point) with ME',...
|
||||
varlist_forecast_ME,texnames,obs_names,...
|
||||
varlist_forecast_ME,'PointForecastME',DirectoryName,'_forc_point_ME',dispString);
|
||||
end
|
||||
end
|
||||
|
||||
if options_.filter_covariance
|
||||
pm3(endo_nbr,endo_nbr,ifil(8),B,'Filtered covariances',...
|
||||
'',varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
oo_=pm3(M_,options_,oo_,endo_nbr,endo_nbr,ifil(8),B,'Filtered covariances',...
|
||||
varlist,M_.endo_names_tex,M_.endo_names,...
|
||||
varlist,'FilterCovariance',DirectoryName,'_filter_covar',dispString);
|
||||
end
|
||||
|
||||
|
|
|
@ -47,14 +47,17 @@ function myoutput=prior_posterior_statistics_core(myinputs,fpar,B,whoiam, ThisMa
|
|||
% You should have received a copy of the GNU General Public License
|
||||
% along with Dynare. If not, see <https://www.gnu.org/licenses/>.
|
||||
|
||||
global options_ oo_ M_ bayestopt_ estim_params_
|
||||
|
||||
if nargin<4
|
||||
whoiam=0;
|
||||
end
|
||||
|
||||
% Reshape 'myinputs' for local computation.
|
||||
% In order to avoid confusion in the name space, the instruction struct2local(myinputs) is replaced by:
|
||||
M_=myinputs.M_;
|
||||
oo_=myinputs.oo_;
|
||||
options_=myinputs.options_;
|
||||
estim_params_=myinputs.estim_params_;
|
||||
bayestopt_=myinputs.bayestopt_;
|
||||
|
||||
type=myinputs.type;
|
||||
run_smoother=myinputs.run_smoother;
|
||||
|
|
|
@ -132,4 +132,4 @@ oo_.MarginalDensity.LaplaceApproximation = Laplace; %reset correct Laplace
|
|||
%test prior sampling
|
||||
options_.prior_draws=100;
|
||||
options_.no_graph.posterior=0;
|
||||
prior_posterior_statistics('prior',dataset_,dataset_info); %get smoothed and filtered objects and forecasts
|
||||
oo_=prior_posterior_statistics('prior',dataset_,dataset_info,M_,oo_,options_,estim_params_,bayestopt_); %get smoothed and filtered objects and forecasts
|
||||
|
|
Loading…
Reference in New Issue