From 4a6783c6900b5f83276af9819c6262af3ad52107 Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?St=C3=A9phane=20Adjemian=20=28Guts=29?= Date: Fri, 15 Dec 2023 12:43:56 +0100 Subject: [PATCH] Fix #1914. Also the first input argument of was wrong (we do not pass bayestopt_ anymore but only the list of estimated parameter names, field `name`). --- matlab/estimation/check_posterior_sampler_options.m | 4 +--- matlab/estimation/marginal_density.m | 2 +- 2 files changed, 2 insertions(+), 4 deletions(-) diff --git a/matlab/estimation/check_posterior_sampler_options.m b/matlab/estimation/check_posterior_sampler_options.m index 3c81972df..e7fab78d6 100644 --- a/matlab/estimation/check_posterior_sampler_options.m +++ b/matlab/estimation/check_posterior_sampler_options.m @@ -464,12 +464,10 @@ if ~strcmp(posterior_sampler_options.posterior_sampling_method,'slice') end if options_.load_mh_file && posterior_sampler_options.use_mh_covariance_matrix - [~, invhess] = compute_mh_covariance_matrix(bayestopt_,fname,dname,outputFolderName); + [~, invhess] = compute_posterior_covariance_matrix(bayestopt_.name, fname, dname, outputFolderName); posterior_sampler_options.invhess = invhess; end - - % check specific options for slice sampler if strcmp(posterior_sampler_options.posterior_sampling_method,'slice') invhess = posterior_sampler_options.invhess; diff --git a/matlab/estimation/marginal_density.m b/matlab/estimation/marginal_density.m index 323857e8b..26e45e526 100644 --- a/matlab/estimation/marginal_density.m +++ b/matlab/estimation/marginal_density.m @@ -51,7 +51,7 @@ TotalNumberOfMhDraws = sum(record.MhDraws(:,1)); TODROP = floor(options_.mh_drop*TotalNumberOfMhDraws); fprintf('marginal density: I''m computing the posterior mean and covariance... '); -[posterior_mean,posterior_covariance,posterior_mode,posterior_kernel_at_the_mode] = compute_mh_covariance_matrix(bayestopt_,M_.fname,M_.dname,outputFolderName); +[posterior_mean, posterior_covariance, posterior_mode, posterior_kernel_at_the_mode] = compute_posterior_covariance_matrix(bayestopt_.name, M_.fname, M_.dname, outputFolderName); MU = transpose(posterior_mean); SIGMA = posterior_covariance;