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1) copy metropolis files 

2) bug fix with mh_drop
time-shift
Marco Ratto 2010-04-14 17:20:29 +02:00
parent 1fc0fbc2c7
commit 47eac6ac88
1 changed files with 8 additions and 2 deletions
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10
matlab/McMCDiagnostics.m
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@ -102,7 +102,13 @@ if isnumeric(options_.parallel),
UDIAG = fout.UDIAG;
clear fout
else
[fout, nBlockPerCPU, totCPU] = masterParallel(options_.parallel, 1, npar,{},'McMCDiagnostics_core', localVars, [], options_.parallel_info);
ModelName = M_.fname;
if ~isempty(M_.bvar)
ModelName = [M_.fname '_bvar'];
end
NamFileInput={[M_.dname '/metropolis/'],[ModelName '_mh*_blck*.mat']};
[fout, nBlockPerCPU, totCPU] = masterParallel(options_.parallel, 1, npar,NamFileInput,'McMCDiagnostics_core', localVars, [], options_.parallel_info);
UDIAG = fout(1).UDIAG;
for j=2:totCPU,
UDIAG = cat(3,UDIAG ,fout(j).UDIAG);
@ -295,7 +301,7 @@ tmp = sortrows(tmp,1);
ligne = 0;
for iter = Origin:StepSize:NumberOfDraws
ligne = ligne+1;
linea = ceil(0.5*iter);
linea = ceil(options_.mh_drop*iter);
n = iter-linea+1;
cinf = round(n*ALPHA/2);
csup = round(n*(1-ALPHA/2));